RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CSN1S1P47710 185 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 TCTAP57738 103 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 DEFB112Q30KQ8 113 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 C10orf99Q6UWK7 81 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
RNF4-201ENST00000314289 OCIAD2Q56VL3 154 aa9.56□□□□□ -0.88
RNF4-201ENST00000314289 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
RNF4-201ENST00000314289 A6NDX4 124 aa9.56□□□□□ -0.88
RNF4-201ENST00000314289 DUX5Q96PT3 197 aa9.56□□□□□ -0.88
RNF4-201ENST00000314289 ARL3P36405 182 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 PSG9Q00887 426 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 FAM162BQ5T6X4 162 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 LYPD1Q8N2G4 141 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 DEFB125Q8N687 156 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 CHCHD1Q96BP2 118 aaKnown RBP9.55□□□□□ -0.88
RNF4-201ENST00000314289 MTORP42345 2549 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 FOXE3Q13461 319 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 C12orf54Q6X4T0 127 aa9.55□□□□□ -0.88
RNF4-201ENST00000314289 TRBV7-1A0A0A6YYK4 115 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 CRXO43186 299 aaPredicted RBP9.54□□□□□ -0.88
RNF4-201ENST00000314289 DEFB1P60022 68 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 PDE6HQ13956 83 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 SMIM12Q96EX1 92 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 SCRT2Q9NQ03 307 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 TRAV8-6A0A0B4J262 113 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 ARMS2P0C7Q2 107 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
RNF4-201ENST00000314289 C19orf54Q5BKX5 351 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 RBPMS2Q6ZRY4 209 aaKnown RBP9.54□□□□□ -0.88
RNF4-201ENST00000314289 LINC01356Q8N9X3 169 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 CT45A10P0DMU9 189 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 METTL26Q96S19 204 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 NOTCH2Q04721 2471 aa9.54□□□□□ -0.88
RNF4-201ENST00000314289 A0A096LNT2 108 aa9.53□□□□□ -0.88
RNF4-201ENST00000314289 IGHG2P01859 326 aa9.53□□□□□ -0.88
RNF4-201ENST00000314289 EDN2P20800 178 aa9.53□□□□□ -0.88
RNF4-201ENST00000314289 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
RNF4-201ENST00000314289 CR1P17927 2039 aa9.53□□□□□ -0.88
RNF4-201ENST00000314289 SMAD7O15105 426 aaKnown RBP9.53□□□□□ -0.88
RNF4-201ENST00000314289 SLC25A16P16260 332 aa9.53□□□□□ -0.88
RNF4-201ENST00000314289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.52□□□□□ -0.88
RNF4-201ENST00000314289 GAGE12BA1L429 117 aa9.52□□□□□ -0.88
RNF4-201ENST00000314289 NPIPB6E9PJ23 425 aa9.52□□□□□ -0.88
RNF4-201ENST00000314289 SH2D1AO60880 128 aa9.52□□□□□ -0.88
RNF4-201ENST00000314289 OR5AL1P0C617 328 aa9.52□□□□□ -0.88
RNF4-201ENST00000314289 RPL11P62913 178 aaKnown RBP9.52□□□□□ -0.88
RNF4-201ENST00000314289 PRR25Q96S07 402 aa9.52□□□□□ -0.88
RNF4-201ENST00000314289 NAA38Q9BRA0 125 aaKnown RBP9.52□□□□□ -0.88
RNF4-201ENST00000314289 J3KRW8 73 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 PPBPP02775 128 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 IGF1P05019 195 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 HIST1H1AQ02539 215 aaPredicted RBP9.52□□□□□ -0.89
RNF4-201ENST00000314289 Q6ZQT7 251 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 HSPB8Q9UJY1 196 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 SRD5A1P18405 259 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 DSCR9P59020 149 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 Q5PR19 223 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 PET117Q6UWS5 81 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 SMIM15Q7Z3B0 74 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 OR4X2Q8NGF9 303 aa9.52□□□□□ -0.89
RNF4-201ENST00000314289 C7orf71A4D174 169 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 IL17RELQ6ZVW7 336 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 FAM223BA6NKX1 122 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 NCR2O95944 276 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 HIST2H2BDQ6DRA6 164 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 C8orf86Q6ZUL3 223 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 FAM223AQ8IWN6 122 aa9.51□□□□□ -0.89
RNF4-201ENST00000314289 CD5LO43866 347 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 CT83Q5H943 113 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 BEX4Q9NWD9 120 aaPredicted RBP9.5□□□□□ -0.89
RNF4-201ENST00000314289 HECTD1Q9ULT8 2610 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 SAP30O75446 220 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 Q96MF0 132 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 AP5S1Q9NUS5 200 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 PEF1Q9UBV8 284 aaKnown RBP9.5□□□□□ -0.89
RNF4-201ENST00000314289 LOC389332A0A1B0GUA5 103 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 TMEM213A2RRL7 107 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 TMEM189A5PLL7 270 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 RAB9AP51151 201 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 FXYD7P58549 80 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
RNF4-201ENST00000314289 ORM1P02763 201 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 KLK9Q2XQG4 91 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 FA2HQ7L5A8 372 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 KLK9Q9UKQ9 250 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 A0A1B0GUT8 65 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 SERTM2A0A1B0GWG4 89 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 IGHV4-31P0DP07 118 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 DEFB113Q30KQ7 82 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 C2orf91Q6ZV80 131 aa9.49□□□□□ -0.89
RNF4-201ENST00000314289 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms