RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 OR9G4Q8NGQ1 327 aa11.66□□□□□ -0.54
CSDC2-201ENST00000306149 PSMG3-AS1Q96PY0 264 aa11.66□□□□□ -0.54
CSDC2-201ENST00000306149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSDC2-201ENST00000306149 ABCA2Q9BZC7 2435 aa11.66□□□□□ -0.54
CSDC2-201ENST00000306149 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
CSDC2-201ENST00000306149 SMAD7O15105 426 aaKnown RBP11.66□□□□□ -0.54
CSDC2-201ENST00000306149 SIVA1O15304 175 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 CELSR2Q9HCU4 2923 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 GOSR1O95249 250 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 UCNP55089 124 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 LMO4P61968 165 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 RNF185Q96GF1 192 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 C11orf21Q9P2W6 132 aa11.65□□□□□ -0.54
CSDC2-201ENST00000306149 HSD52Q0P140 79 aa11.64□□□□□ -0.55
CSDC2-201ENST00000306149 AGPAT4-IT1Q9H0P7 198 aa11.64□□□□□ -0.55
CSDC2-201ENST00000306149 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
CSDC2-201ENST00000306149 A6NDN8 102 aa11.64□□□□□ -0.55
CSDC2-201ENST00000306149 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
CSDC2-201ENST00000306149 SMIM15Q7Z3B0 74 aa11.64□□□□□ -0.55
CSDC2-201ENST00000306149 CENPVL3A0A0U1RRI6 287 aa11.63□□□□□ -0.55
CSDC2-201ENST00000306149 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
CSDC2-201ENST00000306149 IGKV3D-20A0A0C4DH25 116 aa11.63□□□□□ -0.55
CSDC2-201ENST00000306149 H3BRM9 83 aa11.63□□□□□ -0.55
CSDC2-201ENST00000306149 EFNA4P52798 201 aa11.63□□□□□ -0.55
CSDC2-201ENST00000306149 DKK2Q9UBU2 259 aa11.63□□□□□ -0.55
CSDC2-201ENST00000306149 A1L4Q6 167 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 OR4X2Q8NGF9 303 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 NPFFO15130 113 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 UQCRFS1P47985 274 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 LINC01559Q495D7 138 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 C9orf118A6NHY6 69 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 J3KRW8 73 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 BRD3OSQ6XYD6 125 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 PIFOQ8TCI5 191 aa11.62□□□□□ -0.55
CSDC2-201ENST00000306149 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 RBAKDNA6NC62 111 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 TRGV3P03979 118 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 SELENOKQ9Y6D0 94 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 CSPG4Q6UVK1 2322 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 RAB9AP51151 201 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 UFSP1Q6NVU6 142 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 C8orf86Q6ZUL3 223 aa11.61□□□□□ -0.55
CSDC2-201ENST00000306149 CRYBG3Q68DQ2 2970 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 SPRY2O43597 315 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 LEPP41159 167 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 PSMG4Q5JS54 123 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 COL25A1Q9BXS0 654 aaPredicted RBP11.6□□□□□ -0.55
CSDC2-201ENST00000306149 NXT2Q9NPJ8 142 aaKnown RBP11.6□□□□□ -0.55
CSDC2-201ENST00000306149 KLK9Q9UKQ9 250 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 NMUP48645 174 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 DEFB1P60022 68 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 PCP2Q8IVA1 136 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 C5orf56Q8N8D9 126 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 METTL26Q96S19 204 aa11.6□□□□□ -0.55
CSDC2-201ENST00000306149 FCER1GP30273 86 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 ZMAT4Q9H898 229 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 FLNCQ14315 2725 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 GAGE10A6NGK3 116 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 IGF1P05019 195 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 KIR3DS1Q14943 382 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 GTF2H5Q6ZYL4 71 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 AP1S3Q96PC3 154 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 JMJD8Q96S16 334 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
CSDC2-201ENST00000306149 TRBV12-3P01733 135 aa11.58□□□□□ -0.56
CSDC2-201ENST00000306149 CFAP46Q8IYW2 2715 aa11.58□□□□□ -0.56
CSDC2-201ENST00000306149 ATP5G2Q06055 141 aa11.58□□□□□ -0.56
CSDC2-201ENST00000306149 ODF1Q14990 250 aa11.58□□□□□ -0.56
CSDC2-201ENST00000306149 UFC1Q9Y3C8 167 aa11.58□□□□□ -0.56
CSDC2-201ENST00000306149 UTP20O75691 2785 aaKnown RBP11.57□□□□□ -0.56
CSDC2-201ENST00000306149 NAA38Q9BRA0 125 aaKnown RBP11.57□□□□□ -0.56
CSDC2-201ENST00000306149 TTTY13Q9BZ97 58 aa11.57□□□□□ -0.56
CSDC2-201ENST00000306149 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
CSDC2-201ENST00000306149 TMEM238C9JI98 176 aa11.57□□□□□ -0.56
CSDC2-201ENST00000306149 PKD1L2Q7Z442 2459 aa11.57□□□□□ -0.56
CSDC2-201ENST00000306149 TRBV7-1A0A0A6YYK4 115 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 K7EP34 96 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 K7ERU9 68 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 LY6EQ16553 131 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 C16orf92Q96LL3 132 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 CSMD2Q7Z408 3487 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 PRSS1P07477 247 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 PRR9Q5T870 116 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 UNQ9165/PRO28630Q6UXU0 137 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
CSDC2-201ENST00000306149 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 C20orf173Q96LM9 149 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 IGKV3-7A0A075B6H7 116 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 A0A0G2JLM5 398 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 H3BUT2 72 aa11.56□□□□□ -0.56
CSDC2-201ENST00000306149 Q8N8P6 123 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms