RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 POLEQ07864 2286 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 TRAV17A0A0B4J275 112 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 IGLV1-47P01700 117 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 ADIPOQQ15848 244 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 DTX2Q86UW9 622 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 Q8N8P6 123 aa8.45□□□□□ -1.06
ZNF558-201ENST00000301475 COL6A6A6NMZ7 2263 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 NDUFA3O95167 84 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 TRGV3P03979 118 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 EFNA4P52798 201 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 FOXI1Q12951 378 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 GFRALQ6UXV0 394 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 C8orf86Q6ZUL3 223 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 NFE4Q86UQ8 179 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 MRPL16Q9NX20 251 aaKnown RBP8.44□□□□□ -1.06
ZNF558-201ENST00000301475 SH3BGRL2Q9UJC5 107 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 C1QTNF4Q9BXJ3 329 aa8.44□□□□□ -1.06
ZNF558-201ENST00000301475 MT-ATP8P03928 68 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 NBL1P41271 181 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 FOXC1Q12948 553 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 IGFL2Q6UWQ7 119 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 A0A087WX48 190 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 CNIH1O95406 144 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 CFAP126Q5VTH2 177 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 NUP37Q8NFH4 326 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 GLMPQ8WWB7 406 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 IGFBPL1Q8WX77 278 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 DCHS2Q6V1P9 2916 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
ZNF558-201ENST00000301475 BUB1B-PAK6H3BSN5 160 aa8.43□□□□□ -1.06
ZNF558-201ENST00000301475 ZNF418Q8TF45 676 aaPredicted RBP8.42□□□□□ -1.06
ZNF558-201ENST00000301475 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 CYSLTR1Q9Y271 337 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 SMAD5-AS1Q9Y6J3 95 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
ZNF558-201ENST00000301475 NCBP2LA6PVI3 153 aaKnown RBP8.42□□□□□ -1.06
ZNF558-201ENST00000301475 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 COX7A1P24310 79 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 XGP55808 180 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 ERCC8Q13216 396 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 KLRD1Q13241 179 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 SFTA2Q6UW10 78 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 NRACQ8N912 160 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 RPEQ96AT9 228 aa8.42□□□□□ -1.06
ZNF558-201ENST00000301475 LINC01548A6NM66 108 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 GATA3P23771 443 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 DYNAPQ8N1N2 210 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 MYOZ3Q8TDC0 251 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 CFHR4Q92496 578 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 CACNA1BQ00975 2339 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 PRAC2D3DTV9 90 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 LAGE3Q14657 143 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 PTH2Q96A98 100 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 C11orf21Q9P2W6 132 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 SVEP1Q4LDE5 3571 aa8.41□□□□□ -1.06
ZNF558-201ENST00000301475 IGHV3OR16-8A0A075B7F1 116 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 SRSF2Q01130 221 aaKnown RBP8.4□□□□□ -1.06
ZNF558-201ENST00000301475 Q6ZUT4 128 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 ARHGAP32A7KAX9 2087 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 IGKV3D-20A0A0C4DH25 116 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 MYMXA0A1B0GTQ4 84 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 FABP5P3A8MUU1 101 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 LINC01619G3V211 115 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 LGALS1P09382 135 aaKnown RBP8.4□□□□□ -1.06
ZNF558-201ENST00000301475 PLNP26678 52 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 KAAG1Q9UBP8 84 aa8.4□□□□□ -1.06
ZNF558-201ENST00000301475 OR11H12B2RN74 326 aa8.4□□□□□ -1.07
ZNF558-201ENST00000301475 RPL7P18124 248 aaKnown RBP8.4□□□□□ -1.07
ZNF558-201ENST00000301475 IL17RELQ6ZVW7 336 aa8.4□□□□□ -1.07
ZNF558-201ENST00000301475 OR11H1Q8NG94 326 aa8.4□□□□□ -1.07
ZNF558-201ENST00000301475 OR11H2Q8NH07 326 aa8.4□□□□□ -1.07
ZNF558-201ENST00000301475 ZNF48Q96MX3 618 aaPredicted RBP8.4□□□□□ -1.07
ZNF558-201ENST00000301475 SRSF8Q9BRL6 282 aaKnown RBP8.4□□□□□ -1.07
ZNF558-201ENST00000301475 F8VRH5 84 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 TIMM23O14925 209 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 HOXA3O43365 443 aaPredicted RBP8.39□□□□□ -1.07
ZNF558-201ENST00000301475 DLX4Q92988 240 aaPredicted RBP8.39□□□□□ -1.07
ZNF558-201ENST00000301475 LRBAP50851 2863 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 BSPH1Q075Z2 132 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 ZFP2Q6ZN57 461 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 UFC1Q9Y3C8 167 aa8.39□□□□□ -1.07
ZNF558-201ENST00000301475 IGLV11-55A0A075B6I3 123 aa8.38□□□□□ -1.07
ZNF558-201ENST00000301475 TSPAN13O95857 204 aa8.38□□□□□ -1.07
ZNF558-201ENST00000301475 ZNF672Q499Z4 452 aaPredicted RBP8.38□□□□□ -1.07
ZNF558-201ENST00000301475 Q6ZS92 163 aa8.38□□□□□ -1.07
ZNF558-201ENST00000301475 RNF183Q96D59 192 aa8.38□□□□□ -1.07
ZNF558-201ENST00000301475 KLK15Q9H2R5 256 aa8.38□□□□□ -1.07
ZNF558-201ENST00000301475 IGHV3-35A0A0C4DH35 117 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 H7C1H1 209 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 MFAP4P55083 255 aa8.37□□□□□ -1.07
ZNF558-201ENST00000301475 Q6ZQT7 251 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms