RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 IL17RELQ6ZVW7 336 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 WFDC3Q8IUB2 231 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 CELSR2Q9HCU4 2923 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 CENPVL3A0A0U1RRI6 287 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 NPYP01303 97 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 CKS2P33552 79 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 TMEM190Q8WZ59 177 aa9.95□□□□□ -0.82
HIF3A-204ENST00000300862 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 NPFFO15130 113 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 RIPPLY3P57055 190 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 NAA38Q9BRA0 125 aaKnown RBP9.94□□□□□ -0.82
HIF3A-204ENST00000300862 PF4V1P10720 104 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 BRD3OSQ6XYD6 125 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 Q6ZQT7 251 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 U3KQK5 164 aa9.94□□□□□ -0.82
HIF3A-204ENST00000300862 C9orf118A6NHY6 69 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 PKD1L2Q7Z442 2459 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 ITLN2Q8WWU7 325 aaPredicted RBP9.93□□□□□ -0.82
HIF3A-204ENST00000300862 CRYBG3Q68DQ2 2970 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 IGLC6P0CF74 106 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 GNLYP22749 145 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
HIF3A-204ENST00000300862 FABP5P3A8MUU1 101 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 H3BUT2 72 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 DPF1Q92782 380 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 ATP6V0BQ99437 205 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 CFAP46Q8IYW2 2715 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 H3BRM9 83 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 GATA1P15976 413 aaPredicted RBP9.92□□□□□ -0.82
HIF3A-204ENST00000300862 EVI2AP22794 236 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 SCGB2A2Q13296 93 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 BOD1L2Q8IYS8 172 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 C5orf56Q8N8D9 126 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 AGPAT4-IT1Q9H0P7 198 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 C11orf21Q9P2W6 132 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 CSPG4Q6UVK1 2322 aa9.92□□□□□ -0.82
HIF3A-204ENST00000300862 K7EP34 96 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 EEF1AKMT3Q96AZ1 226 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 FLNCQ14315 2725 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 IGHV4-39P01824 125 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 CACNG7P62955 275 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 KIR3DS1Q14943 382 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 RNF185Q96GF1 192 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 PSMG3-AS1Q96PY0 264 aa9.91□□□□□ -0.82
HIF3A-204ENST00000300862 C18orf15Q96N68 181 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 IGKV3D-20A0A0C4DH25 116 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 A0A0G2JLM5 398 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 A6NDN8 102 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 G3V4G9 280 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 SMAD7O15105 426 aaKnown RBP9.9□□□□□ -0.82
HIF3A-204ENST00000300862 ADAMTSL5Q6ZMM2 481 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 METTL26Q96S19 204 aa9.9□□□□□ -0.82
HIF3A-204ENST00000300862 TRBV12-3P01733 135 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 ATP5G2Q06055 141 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 HSD52Q0P140 79 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 LGALS9BQ3B8N2 356 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 LGALS9CQ6DKI2 356 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 OR1N2Q8NGR9 330 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 AP1S3Q96PC3 154 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 CSMD2Q7Z408 3487 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 TRAV40A0A0B4J280 105 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 FBLL1A6NHQ2 334 aaKnown RBP9.89□□□□□ -0.83
HIF3A-204ENST00000300862 HBDP02042 147 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 PAX8Q06710 450 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 LY6EQ16553 131 aa9.89□□□□□ -0.83
HIF3A-204ENST00000300862 UTP20O75691 2785 aaKnown RBP9.89□□□□□ -0.83
HIF3A-204ENST00000300862 TRAV41A0A0B4J266 112 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 TRGV3P03979 118 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 DEFB1P60022 68 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 NEGR1Q7Z3B1 354 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 IGHV4-61A0A0C4DH41 118 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 A1L4Q6 167 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 IGF1P05019 195 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 PCP2Q8IVA1 136 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 OR2K2Q8NGT1 345 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 PIFOQ8TCI5 191 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 SPXQ9BT56 116 aa9.88□□□□□ -0.83
HIF3A-204ENST00000300862 SPRY2O43597 315 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 RAB9AP51151 201 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 TMEM78Q5T7P6 136 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 UNQ9165/PRO28630Q6UXU0 137 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 OR9G4Q8NGQ1 327 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 LCNL1Q6ZST4 164 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
HIF3A-204ENST00000300862 TRAV26-2A0A0B4J265 109 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 IGHV3-11P01762 117 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
HIF3A-204ENST00000300862 C16orf92Q96LL3 132 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms