RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 KIR2DL4Q99706 377 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 K7EIM0 57 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 HSD52Q0P140 79 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 DYNAPQ8N1N2 210 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 ASPMQ8IZT6 3477 aa10.48□□□□□ -0.73
CASC4-201ENST00000299957 PRAC2D3DTV9 90 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 SMAD7O15105 426 aaKnown RBP10.47□□□□□ -0.73
CASC4-201ENST00000299957 CEACAM4O75871 244 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 IGLV2-23P01705 113 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 PAX1P15863 534 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 NXT2Q9NPJ8 142 aaKnown RBP10.47□□□□□ -0.73
CASC4-201ENST00000299957 TRAV12-3A0A0B4J271 114 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 A0A1B0GW15 77 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 C2orf70A6NJV1 201 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 CD5LO43866 347 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 KLRB1Q12918 225 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 SIGLEC15Q6ZMC9 328 aa10.47□□□□□ -0.73
CASC4-201ENST00000299957 H3BUX3 64 aa10.46□□□□□ -0.73
CASC4-201ENST00000299957 SEC11AP67812 179 aa10.46□□□□□ -0.73
CASC4-201ENST00000299957 FOXE3Q13461 319 aa10.46□□□□□ -0.73
CASC4-201ENST00000299957 MRPL35Q9NZE8 188 aaKnown RBP10.46□□□□□ -0.73
CASC4-201ENST00000299957 ETDBQ3ZM63 59 aa10.46□□□□□ -0.73
CASC4-201ENST00000299957 ZNF492Q9P255 531 aa10.46□□□□□ -0.73
CASC4-201ENST00000299957 PRTN3P24158 256 aa10.46□□□□□ -0.74
CASC4-201ENST00000299957 TACC2O95359 2948 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 LGALS3P17931 250 aaKnown RBP10.45□□□□□ -0.74
CASC4-201ENST00000299957 HAX1O00165 279 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 WIPF2Q8TF74 440 aaPredicted RBP10.45□□□□□ -0.74
CASC4-201ENST00000299957 CHAC1Q9BUX1 264 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 EXPH5Q8NEV8 1989 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 H3BRN7 92 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 OVOL3O00110 214 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
CASC4-201ENST00000299957 PSMG4Q5JS54 123 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 OR4X2Q8NGF9 303 aa10.45□□□□□ -0.74
CASC4-201ENST00000299957 CHTOPQ9Y3Y2 248 aaKnown RBP10.45□□□□□ -0.74
CASC4-201ENST00000299957 TRAV41A0A0B4J266 112 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 COX8AP10176 69 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 LAGE3Q14657 143 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 PIP4P1Q86T03 277 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 DTX2Q86UW9 622 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 MUC3AQ02505 3323 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 DCHS1Q96JQ0 3298 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 I3L2K1 104 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 ID1P41134 155 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 SMIM12Q96EX1 92 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 ZZEF1O43149 2961 aa10.44□□□□□ -0.74
CASC4-201ENST00000299957 MBD6Q96DN6 1003 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 KNCNA6PVL3 124 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 PPBPP02775 128 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 RAB9AP51151 201 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 IGFL3Q6UXB1 125 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 LINC00311Q8N616 119 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 GFRA4Q9GZZ7 299 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 TRAV2A0A0B4J234 112 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 GAGE1Q13065 139 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 IGFL2Q6UWQ7 119 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 SLC50A1Q9BRV3 221 aa10.43□□□□□ -0.74
CASC4-201ENST00000299957 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 A0A1W2PRX2 142 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 CT83Q5H943 113 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 FASNP49327 2511 aaKnown RBP10.42□□□□□ -0.74
CASC4-201ENST00000299957 CSTL1Q9H114 145 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 H3BMG7 143 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 DYNLRB2Q8TF09 96 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 CFHR4Q92496 578 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 AGPAT4-IT1Q9H0P7 198 aa10.42□□□□□ -0.74
CASC4-201ENST00000299957 TMEM238LA0A1B0GVL6 79 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 A6NJY4 79 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 CRXO43186 299 aaPredicted RBP10.41□□□□□ -0.74
CASC4-201ENST00000299957 NPFFR1Q9GZQ6 430 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 NCOR1P1Q9H4R4 102 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 OR9G4Q8NGQ1 327 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 RAX2Q96IS3 184 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 PRRC2AP48634 2157 aaKnown RBP10.41□□□□□ -0.74
CASC4-201ENST00000299957 TAX1BP3O14907 124 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 KLF5Q13887 457 aaPredicted RBP10.41□□□□□ -0.74
CASC4-201ENST00000299957 SAMD13Q5VXD3 122 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 ADAMTSL5Q6ZMM2 481 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 C1orf122Q6ZSJ8 110 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 C8orf86Q6ZUL3 223 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 CCL19Q99731 98 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
CASC4-201ENST00000299957 LINC01548A6NM66 108 aa10.4□□□□□ -0.74
CASC4-201ENST00000299957 IGLV1-47P01700 117 aa10.4□□□□□ -0.74
CASC4-201ENST00000299957 ZNF80P51504 273 aaPredicted RBP10.4□□□□□ -0.74
CASC4-201ENST00000299957 IGHV4-39P01824 125 aa10.4□□□□□ -0.74
CASC4-201ENST00000299957 RHPN1-AS1Q9BWJ2 59 aa10.4□□□□□ -0.74
CASC4-201ENST00000299957 PGPEP1Q9NXJ5 209 aa10.4□□□□□ -0.74
CASC4-201ENST00000299957 NPFFO15130 113 aa10.4□□□□□ -0.75
CASC4-201ENST00000299957 ESDP10768 282 aa10.4□□□□□ -0.75
CASC4-201ENST00000299957 ITLN2Q8WWU7 325 aaPredicted RBP10.4□□□□□ -0.75
CASC4-201ENST00000299957 ZNF462Q96JM2 2506 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms