RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 TRBV20OR9-2A0A075B6H5 130 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 IGHV3OR16-12A0A075B7B8 117 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 RBFOX3A6NFN3 312 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 A8MTW9 85 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 IFNA1P01562 189 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 SRP19P09132 144 aaKnown RBP4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 CSN1S1P47710 185 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 PPT1P50897 306 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 ZNF80P51504 273 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 MEF2BQ02080 365 aaPredicted RBP4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 CENPWQ5EE01 88 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 EBLN2Q6P2I7 272 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 SBSPONQ8IVN8 264 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 ZFAND2AQ8N6M9 145 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 TMEM75Q8N9X5 138 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 OR10J6PQ8NGY7 276 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 C11orf52Q96A22 123 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 IGF2BP2-AS1Q96M15 143 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 FAM210AQ96ND0 272 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 ATG101Q9BSB4 218 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 PSG8Q9UQ74 426 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 RNF24Q9Y225 148 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 PRELID1Q9Y255 219 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 ARL2-SNX15V9GYD0 113 aa4.73□□□□□ -1.65
DEPDC4-201ENST00000299185 LOC102724200A0A096LPH7 203 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 ZNF561-AS1K7EIQ3 104 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 DEFB4AO15263 64 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 CRXO43186 299 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 SPRY2O43597 315 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 ZNF138P52744 262 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 FLI1Q01543 452 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 MUC21Q5SSG8 566 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 LINC00322Q6ZN03 302 aaPredicted RBP4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 ZC2HC1AQ96GY0 325 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 EIF5A2Q9GZV4 153 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 SMDT1Q9H4I9 107 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 TREM1Q9NP99 234 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 ZNF492Q9P255 531 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 VAX2Q9UIW0 290 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 NAGKQ9UJ70 344 aa4.72□□□□□ -1.65
DEPDC4-201ENST00000299185 TRAV12-3A0A0B4J271 114 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 DUSP14O95147 198 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 ADCYAP1P18509 176 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 RNASE4P34096 147 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 TAGLN2P37802 199 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 RPL35P42766 123 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 RPL19P84098 196 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 TMEM78Q5T7P6 136 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 SAMD13Q5VXD3 122 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 PRR27Q6MZM9 219 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 UQCC3Q6UW78 93 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 C9orf47Q6ZRZ4 202 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 LYPD1Q8N2G4 141 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 FAM19A4Q96LR4 140 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 WWC2-AS2Q96NR7 200 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 CLUHP3Q96NS8 147 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 PARLQ9H300 379 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 PPP1R14DQ9NXH3 145 aa4.71□□□□□ -1.66
DEPDC4-201ENST00000299185 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 C7orf71A4D174 169 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 ZNF705GA8MUZ8 300 aaPredicted RBP4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 KLLNB2CW77 178 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 K7EN84 100 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 M0R036 132 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 SH2D1AO60880 128 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 NDUFS6O75380 124 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 INSP01308 110 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 IGLV2-8P01709 118 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 SFTA3P0C7M3 94 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 LEPP41159 167 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 UBE2G1P62253 170 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 OR5I1Q13606 314 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 PEA15Q15121 130 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 TMEM183BQ1AE95 376 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 TXNDC17Q9BRA2 123 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 TP53TG3Q9ULZ0 132 aa4.7□□□□□ -1.66
DEPDC4-201ENST00000299185 RBAKDNA6NC62 111 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 GCGP01275 180 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 LTAP01374 205 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 MGST1P10620 155 aaKnown RBP4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 HTN1P15515 57 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 CRISP2P16562 243 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 S100A1P23297 94 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 CRIP1P50238 77 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 CMC4P56277 68 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 BAGE2Q86Y30 109 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 CSNK1G2-AS1Q8NCQ2 148 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 HIST1H2BAQ96A08 127 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 FMC1Q96HJ9 113 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 SMIM7Q9BQ49 75 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 OVOL2Q9BRP0 275 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 NKX6-2Q9C056 277 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 CSTL1Q9H114 145 aa4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 TIMM8BQ9Y5J9 83 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-201ENST00000299185 IGHV4-28A0A0C4DH34 117 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 GRIFINA4D1Z8 144 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 A8MZ25 164 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms