RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 C11orf21Q9P2W6 132 aa19.34■□□□□ 0.69
SDCCAG3-201ENST00000298537 AMBPP02760 352 aa19.33■□□□□ 0.69
SDCCAG3-201ENST00000298537 SRIP30626 198 aa19.33■□□□□ 0.69
SDCCAG3-201ENST00000298537 HBBP68871 147 aa19.33■□□□□ 0.69
SDCCAG3-201ENST00000298537 FBLL1A6NHQ2 334 aaKnown RBP19.33■□□□□ 0.68
SDCCAG3-201ENST00000298537 S100A2P29034 98 aa19.33■□□□□ 0.68
SDCCAG3-201ENST00000298537 FOXA3P55318 350 aaPredicted RBP19.33■□□□□ 0.68
SDCCAG3-201ENST00000298537 REC114Q7Z4M0 266 aa19.32■□□□□ 0.68
SDCCAG3-201ENST00000298537 FAM231BA6NCW3 169 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 A8MWP6 167 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 KLF5Q13887 457 aaPredicted RBP19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 ATP5L2Q7Z4Y8 100 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 SORL1Q92673 2214 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 C2orf70A6NJV1 201 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 KIR3DS1Q14943 382 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 MS4A6AQ9H2W1 248 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 NIT2Q9NQR4 276 aa19.31■□□□□ 0.68
SDCCAG3-201ENST00000298537 ORM1P02763 201 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 S100A8P05109 93 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 SRSF2Q01130 221 aaKnown RBP19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 RASL11AQ6T310 242 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 KLHL30-AS1Q8NEE0 82 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 HIST1H1AQ02539 215 aaPredicted RBP19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 COX19Q49B96 90 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 CDPF1Q6NVV7 123 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 LYZL1Q6UWQ5 148 aa19.3■□□□□ 0.68
SDCCAG3-201ENST00000298537 A0A1W2PRX2 142 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 LGALS9O00182 355 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 IQCJQ1A5X6 159 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 RCHY1Q96PM5 261 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 FABP5P3A8MUU1 101 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 SERF1AO75920 110 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 CD28P10747 220 aa19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 PACRGQ96M98 296 aaPredicted RBP19.29■□□□□ 0.68
SDCCAG3-201ENST00000298537 PYY3Q5JQD4 70 aa19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 C4orf3Q8WVX3 66 aa19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 WFDC12Q8WWY7 111 aa19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 SETXQ7Z333 2677 aaKnown RBP19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 IGKV3D-20A0A0C4DH25 116 aa19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 RNASE1P07998 156 aaKnown RBP19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 BMI1P35226 326 aa19.28■□□□□ 0.68
SDCCAG3-201ENST00000298537 HIVEP1P15822 2718 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 A0A1B0GUT8 65 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 LINC01619G3V211 115 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 ZNF688P0C7X2 276 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 CD33P20138 364 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 OR8A1Q8NGG7 326 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 LINC01006Q8NI28 216 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 CLEC5AQ9NY25 188 aa19.27■□□□□ 0.68
SDCCAG3-201ENST00000298537 HAX1O00165 279 aa19.26■□□□□ 0.67
SDCCAG3-201ENST00000298537 OR1N2Q8NGR9 330 aa19.26■□□□□ 0.67
SDCCAG3-201ENST00000298537 DLX4Q92988 240 aaPredicted RBP19.26■□□□□ 0.67
SDCCAG3-201ENST00000298537 OR10J6PQ8NGY7 276 aa19.26■□□□□ 0.67
SDCCAG3-201ENST00000298537 NIPBLQ6KC79 2804 aaeCLIP19.26■□□□□ 0.67
SDCCAG3-201ENST00000298537 BAGE3Q86Y29 109 aa19.25■□□□□ 0.67
SDCCAG3-201ENST00000298537 OVOL1O14753 267 aa19.25■□□□□ 0.67
SDCCAG3-201ENST00000298537 ZFAND2AQ8N6M9 145 aa19.25■□□□□ 0.67
SDCCAG3-201ENST00000298537 WNK1Q9H4A3 2382 aa19.25■□□□□ 0.67
SDCCAG3-201ENST00000298537 Q0VG73 95 aa19.24■□□□□ 0.67
SDCCAG3-201ENST00000298537 HILS1P60008 231 aa19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 PSMG4Q5JS54 123 aa19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 DPF1Q92782 380 aa19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 ALKBH7Q9BT30 221 aaPredicted RBP19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 LINC01559Q495D7 138 aa19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 C18orf32Q8TCD1 76 aa19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 PPP1R14DQ9NXH3 145 aa19.23■□□□□ 0.67
SDCCAG3-201ENST00000298537 IGLC6P0CF74 106 aa19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 LINC00477Q96M19 166 aa19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 MSRB1Q9NZV6 116 aa19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 AGRNO00468 2067 aa19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 FER1L6-AS1Q8NA97 138 aa19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 ZNF418Q8TF45 676 aaPredicted RBP19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 RAX2Q96IS3 184 aa19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 CITED2Q99967 270 aaPredicted RBP19.22■□□□□ 0.67
SDCCAG3-201ENST00000298537 INAFM1C9JVW0 142 aa19.21■□□□□ 0.67
SDCCAG3-201ENST00000298537 K7EQG2 157 aa19.21■□□□□ 0.67
SDCCAG3-201ENST00000298537 TMEM160Q9NX00 188 aa19.21■□□□□ 0.67
SDCCAG3-201ENST00000298537 FLNBO75369 2602 aaKnown RBP19.21■□□□□ 0.67
SDCCAG3-201ENST00000298537 NSD1Q96L73 2696 aaPredicted RBP19.2■□□□□ 0.66
SDCCAG3-201ENST00000298537 RIGQ13278 110 aa19.2■□□□□ 0.66
SDCCAG3-201ENST00000298537 OR9G4Q8NGQ1 327 aa19.2■□□□□ 0.66
SDCCAG3-201ENST00000298537 FAM19A4Q96LR4 140 aa19.2■□□□□ 0.66
SDCCAG3-201ENST00000298537 M0QZ24 198 aa19.19■□□□□ 0.66
SDCCAG3-201ENST00000298537 FN1P02751 2386 aaKnown RBP19.19■□□□□ 0.66
SDCCAG3-201ENST00000298537 IGKV3-20P01619 116 aa19.19■□□□□ 0.66
SDCCAG3-201ENST00000298537 ID1P41134 155 aa19.19■□□□□ 0.66
SDCCAG3-201ENST00000298537 SPRY2O43597 315 aa19.18■□□□□ 0.66
SDCCAG3-201ENST00000298537 Q6AWC8 147 aa19.18■□□□□ 0.66
SDCCAG3-201ENST00000298537 NAGKQ9UJ70 344 aa19.18■□□□□ 0.66
SDCCAG3-201ENST00000298537 RNASE4P34096 147 aaKnown RBP19.18■□□□□ 0.66
SDCCAG3-201ENST00000298537 CTRLP40313 264 aa19.18■□□□□ 0.66
SDCCAG3-201ENST00000298537 OR10J3Q5JRS4 329 aa19.18■□□□□ 0.66
SDCCAG3-201ENST00000298537 LOC102724200A0A096LPH7 203 aaPredicted RBP19.17■□□□□ 0.66
SDCCAG3-201ENST00000298537 NTF3P20783 257 aa19.17■□□□□ 0.66
SDCCAG3-201ENST00000298537 TMEM18Q96B42 140 aa19.17■□□□□ 0.66
SDCCAG3-201ENST00000298537 RPS20P60866 119 aaKnown RBP19.17■□□□□ 0.66
SDCCAG3-201ENST00000298537 C16orf95Q9H693 158 aa19.17■□□□□ 0.66
SDCCAG3-201ENST00000298537 CSN3P07498 182 aa19.16■□□□□ 0.66
SDCCAG3-201ENST00000298537 GPX1P07203 203 aa19.16■□□□□ 0.66
SDCCAG3-201ENST00000298537 LENEPQ9Y5L5 61 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms