RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 IGHV3-66A0A0C4DH42 116 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 IGFBPL1Q8WX77 278 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 CITED1Q99966 193 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 TRGV3P03979 118 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 IFITM1P13164 125 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
CLDN1-201ENST00000295522 TAL2Q16559 108 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 APC2O95996 2303 aa7.98□□□□□ -1.13
CLDN1-201ENST00000295522 SMG1Q96Q15 3661 aaKnown RBP7.97□□□□□ -1.13
CLDN1-201ENST00000295522 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 NTN3O00634 580 aaPredicted RBP7.97□□□□□ -1.13
CLDN1-201ENST00000295522 PLNP26678 52 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 MEIG1Q5JSS6 88 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 ZNF833PQ6ZTB9 187 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 PPP1R27Q86WC6 154 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 C9orf106Q8NAJ2 232 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 SRSF1Q07955 248 aaKnown RBP eCLIP7.97□□□□□ -1.13
CLDN1-201ENST00000295522 PSMG4Q5JS54 123 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 OR11H6Q8NGC7 330 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 U3KQK5 164 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 PIEZO2Q9H5I5 2752 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 TRBV7-3A0A075B6L6 115 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 A0A087WX48 190 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 MGPP08493 103 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 LGALS1P09382 135 aaKnown RBP7.97□□□□□ -1.13
CLDN1-201ENST00000295522 HES1Q14469 280 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 TRPT1Q86TN4 253 aaKnown RBP7.97□□□□□ -1.13
CLDN1-201ENST00000295522 NTN5Q8WTR8 489 aaPredicted RBP7.97□□□□□ -1.13
CLDN1-201ENST00000295522 PRR25Q96S07 402 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
CLDN1-201ENST00000295522 IGHV3-49A0A0A0MS15 119 aa7.96□□□□□ -1.13
CLDN1-201ENST00000295522 H7C1H1 209 aa7.96□□□□□ -1.13
CLDN1-201ENST00000295522 CRLF1O75462 422 aa7.96□□□□□ -1.13
CLDN1-201ENST00000295522 ACACAQ13085 2346 aa7.96□□□□□ -1.13
CLDN1-201ENST00000295522 DMXL2Q8TDJ6 3036 aa7.96□□□□□ -1.14
CLDN1-201ENST00000295522 SLC25A20O43772 301 aa7.96□□□□□ -1.14
CLDN1-201ENST00000295522 IGKV1-17P01599 117 aa7.96□□□□□ -1.14
CLDN1-201ENST00000295522 TMEM200BQ69YZ2 307 aa7.96□□□□□ -1.14
CLDN1-201ENST00000295522 ARHGAP32A7KAX9 2087 aa7.96□□□□□ -1.14
CLDN1-201ENST00000295522 FABP5P3A8MUU1 101 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 F8VRH5 84 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 M0R381 172 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 Q6ZQT7 251 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 Q8N8P6 123 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 ATP6V0E2Q8NHE4 81 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 TECTAO75443 2155 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 IGHV3-64A0A075B6Q5 118 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 OVOL3O00110 214 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 NDUFB3O43676 98 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 ID1P41134 155 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 TMEM170BQ5T4T1 132 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 RNF185Q96GF1 192 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 SPRY4Q9C004 299 aa7.95□□□□□ -1.14
CLDN1-201ENST00000295522 SHISA9B4DS77 424 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 IGLV2-23P01705 113 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 WT1P19544 449 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-201ENST00000295522 ZNF71Q9NQZ8 489 aaPredicted RBP7.94□□□□□ -1.14
CLDN1-201ENST00000295522 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 PCSK5Q92824 1860 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 IGHV1-46P01743 117 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 PAX8Q06710 450 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 RNF182Q8N6D2 247 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 C15orf53Q8NAA6 179 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 SPENQ96T58 3664 aaKnown RBP7.94□□□□□ -1.14
CLDN1-201ENST00000295522 TM4SF5O14894 197 aa7.94□□□□□ -1.14
CLDN1-201ENST00000295522 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 S100A4P26447 101 aaKnown RBP7.93□□□□□ -1.14
CLDN1-201ENST00000295522 CSMD1Q96PZ7 3565 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 CRYGCP07315 174 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 CRIP2P52943 208 aaPredicted RBP7.93□□□□□ -1.14
CLDN1-201ENST00000295522 LYPD2Q6UXB3 125 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 ZNF491Q8N8L2 437 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 VCX2Q9H322 139 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 SIGLEC9Q9Y336 463 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 TRAV2A0A0B4J234 112 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 H3BRN7 92 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 NHLRC4P0CG21 123 aaPredicted RBP7.93□□□□□ -1.14
CLDN1-201ENST00000295522 IL17RELQ6ZVW7 336 aa7.93□□□□□ -1.14
CLDN1-201ENST00000295522 HERVK_113P61574 105 aa7.92□□□□□ -1.14
CLDN1-201ENST00000295522 MGAQ8IWI9 3026 aa7.92□□□□□ -1.14
CLDN1-201ENST00000295522 LHBP01229 141 aa7.92□□□□□ -1.14
CLDN1-201ENST00000295522 DLX6P56179 175 aa7.92□□□□□ -1.14
CLDN1-201ENST00000295522 TCF15Q12870 199 aa7.92□□□□□ -1.14
CLDN1-201ENST00000295522 ZNF56Q15929 161 aa7.92□□□□□ -1.14
CLDN1-201ENST00000295522 TEX49A0A1B0GTD5 131 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 MRPL23Q16540 153 aaKnown RBP7.91□□□□□ -1.14
CLDN1-201ENST00000295522 NDUFA11Q86Y39 141 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 GATD1Q8NB37 220 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 CFHR4Q92496 578 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 GLRXP35754 106 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 CHCHD5Q9BSY4 110 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 ZFHX2Q9C0A1 2572 aaPredicted RBP7.91□□□□□ -1.14
CLDN1-201ENST00000295522 K7EM74 188 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 RHODO00212 210 aa7.91□□□□□ -1.14
CLDN1-201ENST00000295522 PRSS2P07478 247 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms