RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TMEM155Q4W5P6 130 aa8.85□□□□□ -0.99
SCLT1-201ENST00000281142 CELSR2Q9HCU4 2923 aa8.85□□□□□ -0.99
SCLT1-201ENST00000281142 WNK2Q9Y3S1 2297 aa8.85□□□□□ -0.99
SCLT1-201ENST00000281142 A0A1B0GW15 77 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 NPIPB5A8MRT5 1133 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 PPIFP30405 207 aaKnown RBP8.84□□□□□ -0.99
SCLT1-201ENST00000281142 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
SCLT1-201ENST00000281142 IGHV3OR16-8A0A075B7F1 116 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 IGHV1-3A0A0C4DH29 117 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 SHISA9B4DS77 424 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 PLGLAQ15195 96 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 RNF125Q96EQ8 232 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 CHAC1Q9BUX1 264 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 HHLA3Q9XRX5 114 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
SCLT1-201ENST00000281142 SPTAN1Q13813 2472 aaKnown RBP8.84□□□□□ -0.99
SCLT1-201ENST00000281142 F8W1H4 67 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 H3BMG7 143 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 LEPP41159 167 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 ZNF562Q6V9R5 426 aa8.84□□□□□ -0.99
SCLT1-201ENST00000281142 TNFRSF13BO14836 293 aaPredicted RBP8.83□□□□□ -1
SCLT1-201ENST00000281142 IGHV3-23P01764 117 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 GATA3P23771 443 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 ODF1Q14990 250 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 Q6AWC8 147 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 CNIH1O95406 144 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 CD3EP07766 207 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 RNF185Q96GF1 192 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 CSMD2Q7Z408 3487 aa8.83□□□□□ -1
SCLT1-201ENST00000281142 LYNX1G3V0Z9 82 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 LYNX1P0DP58 116 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 MRPL16Q9NX20 251 aaKnown RBP8.82□□□□□ -1
SCLT1-201ENST00000281142 TRBV25-1A0A075B6N4 114 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 A0A1W2PPR1 153 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 PRSS1P07477 247 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 AMTNQ6UX39 209 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 MAPKAPK5-AS1Q8N8E1 139 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 NUP37Q8NFH4 326 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 FOXC2Q99958 501 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 E9PLD3 99 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 C8orf31Q8N9H6 132 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 C20orf78Q9BR46 151 aa8.82□□□□□ -1
SCLT1-201ENST00000281142 FBN2P35556 2912 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 E7EQL1 145 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 TSPAN13O95857 204 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 IGLV1-47P01700 117 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 C5orf64Q2M2E5 130 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 IGHV3-35A0A0C4DH35 117 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 A6NJY4 79 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 PRR25Q96S07 402 aa8.81□□□□□ -1
SCLT1-201ENST00000281142 ABCA4P78363 2273 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 DOPEY2Q9Y3R5 2298 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 IGLL5B9A064 214 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 BUB1B-PAK6H3BSN5 160 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 LCNL1Q6ZST4 164 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 AAMDCQ9H7C9 122 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 PRO0461Q9UI25 63 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 ASH1LQ9NR48 2969 aaKnown RBP8.8□□□□□ -1
SCLT1-201ENST00000281142 ORM1P02763 201 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 ZNF672Q499Z4 452 aaPredicted RBP8.8□□□□□ -1
SCLT1-201ENST00000281142 TMEM158Q8WZ71 300 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 TMEM160Q9NX00 188 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 CENPEQ02224 2701 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 VPS13CQ709C8 3753 aa8.8□□□□□ -1
SCLT1-201ENST00000281142 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 MAP1LC3AQ9H492 121 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 ZMAT4Q9H898 229 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 TRAV40A0A0B4J280 105 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 TNFRSF6BO95407 300 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 IGKCP01834 107 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 IGLC6P0CF74 106 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 ERCC8Q13216 396 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 C8orf86Q6ZUL3 223 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 ZNF418Q8TF45 676 aaPredicted RBP8.79□□□□□ -1
SCLT1-201ENST00000281142 RPEQ96AT9 228 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 ZNF479Q96JC4 524 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 CDIP1Q9H305 208 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 IGHG4P01861 327 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 CEND1Q8N111 149 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 HIGD1BQ9P298 99 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
SCLT1-201ENST00000281142 TIMM23O14925 209 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 FCER1GP30273 86 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 FASNP49327 2511 aaKnown RBP8.78□□□□□ -1
SCLT1-201ENST00000281142 MED13LQ71F56 2210 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 TRAV26-2A0A0B4J265 109 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 MT-ATP8P03928 68 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 COX6B1P14854 86 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 FHL3Q13643 280 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 GAGE13Q4V321 117 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 RNF183Q96D59 192 aa8.78□□□□□ -1
SCLT1-201ENST00000281142 MRPL35Q9NZE8 188 aaKnown RBP8.78□□□□□ -1
SCLT1-201ENST00000281142 PRAC2D3DTV9 90 aa8.77□□□□□ -1
SCLT1-201ENST00000281142 F8W735 103 aaPredicted RBP8.77□□□□□ -1
SCLT1-201ENST00000281142 TRGV3P03979 118 aa8.77□□□□□ -1
SCLT1-201ENST00000281142 SPINK8P0C7L1 97 aa8.77□□□□□ -1
SCLT1-201ENST00000281142 HIST2H2BCQ6DN03 193 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms