RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ADARB2-AS1A8MUL3 147 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 GALR1P47211 349 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 RPL19P84098 196 aaKnown RBP8.84□□□□□ -0.99
SSRP1-201ENST00000278412 KLF5Q13887 457 aaPredicted RBP8.84□□□□□ -0.99
SSRP1-201ENST00000278412 TMEM183BQ1AE95 376 aa8.84□□□□□ -0.99
SSRP1-201ENST00000278412 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -0.99
SSRP1-201ENST00000278412 C2orf70A6NJV1 201 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 J3KRW8 73 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 CBLN1P23435 193 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 KIR3DS1Q14943 382 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.83□□□□□ -1
SSRP1-201ENST00000278412 C4orf3Q8WVX3 66 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 AAMDCQ9H7C9 122 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 KLF12Q9Y4X4 402 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 C9JCJ5 164 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 SOCS3O14543 225 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 UBE2V1Q13404 147 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 BATFQ16520 125 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 C16orf92Q96LL3 132 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 IMMP2LQ96T52 175 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 ATP6V0BQ99437 205 aa8.83□□□□□ -1
SSRP1-201ENST00000278412 H7BYZ3 331 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 CRIP1P50238 77 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 ZNF80P51504 273 aaPredicted RBP8.82□□□□□ -1
SSRP1-201ENST00000278412 GDF5OSQ5U4N7 250 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 IZUMO1RA6ND01 250 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 LINC01619G3V211 115 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 LTAP01374 205 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 CD33P20138 364 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 TMEM75Q8N9X5 138 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 MLST8Q9BVC4 326 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 C16orf95Q9H693 158 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 PSG8Q9UQ74 426 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 V9GYV3 84 aa8.82□□□□□ -1
SSRP1-201ENST00000278412 A0A087X0K7 114 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 TMEM238C9JI98 176 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 PDE6HQ13956 83 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 PSG3Q16557 428 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 DPF1Q92782 380 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 ZNF688P0C7X2 276 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 OR2D3Q8NGH3 330 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 OR10G8Q8NGN5 311 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 NUDT11Q96G61 164 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 GPR82Q96P67 336 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 CSTL1Q9H114 145 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 MS4A6AQ9H2W1 248 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 NRN1Q9NPD7 142 aa8.81□□□□□ -1
SSRP1-201ENST00000278412 NOTCH1P46531 2555 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 CCL24O00175 119 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 RNF151Q2KHN1 245 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 DCANP1Q8TF63 244 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 AGPAT4-IT1Q9H0P7 198 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 TMSB15BA0A087X1C1 80 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 IGKV3-20P01619 116 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 TYMSP04818 313 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 PSG9Q00887 426 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 IBA57Q5T440 356 aaKnown RBP8.8□□□□□ -1
SSRP1-201ENST00000278412 PRR9Q5T870 116 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 ZNF738Q8NE65 137 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 UFC1Q9Y3C8 167 aa8.8□□□□□ -1
SSRP1-201ENST00000278412 MUC21A0A0G2JKD1 596 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 MUC21A0A140T8X8 626 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 MUC21Q5SSG8 566 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 TMEM61Q8N0U2 210 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 STPG4Q8N801 248 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 OR9G4Q8NGQ1 327 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 FMC1Q96HJ9 113 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 CBY3A6NI87 242 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 K7EMT4 169 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 SCGB2A2Q13296 93 aa8.79□□□□□ -1
SSRP1-201ENST00000278412 CSN3P07498 182 aa8.78□□□□□ -1
SSRP1-201ENST00000278412 TDRG1Q3Y452 100 aa8.78□□□□□ -1
SSRP1-201ENST00000278412 S100A7AQ86SG5 101 aa8.78□□□□□ -1
SSRP1-201ENST00000278412 SPRY2O43597 315 aa8.78□□□□□ -1
SSRP1-201ENST00000278412 CSN1S1P47710 185 aa8.78□□□□□ -1
SSRP1-201ENST00000278412 A0A1W2PS18 150 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 NDUFA7O95182 113 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 FHL3Q13643 280 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 PSMG4Q5JS54 123 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 PRR25Q96S07 402 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 VAMP8Q9BV40 100 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 RNF24Q9Y225 148 aa8.77□□□□□ -1
SSRP1-201ENST00000278412 TSSC4Q9Y5U2 329 aaPredicted RBP8.77□□□□□ -1
SSRP1-201ENST00000278412 LGALS9O00182 355 aa8.77□□□□□ -1.01
SSRP1-201ENST00000278412 CD300EQ496F6 205 aaPredicted RBP8.77□□□□□ -1.01
SSRP1-201ENST00000278412 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
SSRP1-201ENST00000278412 GRAMD2BQ96HH9 432 aa8.77□□□□□ -1.01
SSRP1-201ENST00000278412 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
SSRP1-201ENST00000278412 RPS20P60866 119 aaKnown RBP8.76□□□□□ -1.01
SSRP1-201ENST00000278412 HIST1H1AQ02539 215 aaPredicted RBP8.76□□□□□ -1.01
SSRP1-201ENST00000278412 GTSF1Q8WW33 167 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 C11orf21Q9P2W6 132 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 PAM16Q9Y3D7 125 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 C19orf71A6NCJ1 209 aa8.76□□□□□ -1.01
SSRP1-201ENST00000278412 ZNF253O75346 499 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms