RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 YAE1D1Q9NRH1 226 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 C11orf21Q9P2W6 132 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 PDZD2O15018 2839 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 IGKV3D-20A0A0C4DH25 116 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 ZNF324O75467 553 aaPredicted RBP7.24□□□□□ -1.25
TRIM55-201ENST00000276573 ID1P41134 155 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 SYNJ2BPP57105 145 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 DEFB1P60022 68 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 SSTP61278 116 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 OR8A1Q8NGG7 326 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 DCANP1Q8TF63 244 aa7.24□□□□□ -1.25
TRIM55-201ENST00000276573 MXRA5Q9NR99 2828 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 MUC21A0A0G2JKD1 596 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 MUC21A0A140T8X8 626 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 DNAJC9-AS1A6NH13 148 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 HOXD3P31249 432 aaPredicted RBP7.23□□□□□ -1.25
TRIM55-201ENST00000276573 AMTP48728 403 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 MUC21Q5SSG8 566 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 SAMD13Q5VXD3 122 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 Q6ZSV7 163 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
TRIM55-201ENST00000276573 F6UB75 175 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 SCGB1D1O95968 90 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 CD33P20138 364 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 NTF3P20783 257 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 PRR9Q5T870 116 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 FAM104BQ5XKR9 115 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 C18orf65Q6ZTR6 163 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 FAM19A2Q8N3H0 131 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 ZFAND2AQ8N6M9 145 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 FAM19A4Q96LR4 140 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 MS4A6AQ9H2W1 248 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 TRBV7-9A0A0J9YWB2 115 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 PMCHP20382 165 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 TWIST1Q15672 202 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 Q6ZQT7 251 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 CNFNQ9BYD5 112 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 ESM1Q9NQ30 184 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 NAGKQ9UJ70 344 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 ITPR3Q14573 2671 aa7.22□□□□□ -1.25
TRIM55-201ENST00000276573 C2orf70A6NJV1 201 aa7.21□□□□□ -1.26
TRIM55-201ENST00000276573 HSBP1O75506 76 aa7.21□□□□□ -1.26
TRIM55-201ENST00000276573 RNASEKQ6P5S7 137 aaKnown RBP7.21□□□□□ -1.26
TRIM55-201ENST00000276573 CREBBPQ92793 2442 aa7.21□□□□□ -1.26
TRIM55-201ENST00000276573 K7EQG2 157 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 LINC00614P0C842 121 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 SLURP1P55000 103 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 MRPL51Q4U2R6 128 aaKnown RBP7.2□□□□□ -1.26
TRIM55-201ENST00000276573 ADAMTSL5Q6ZMM2 481 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 APRG1Q8IVJ8 170 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 C4orf3Q8WVX3 66 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
TRIM55-201ENST00000276573 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 MSRB1Q9NZV6 116 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 RNF114Q9Y508 228 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 U3KQK5 164 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 TRAV21A0A0B4J279 112 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 LINC01619G3V211 115 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 J3KRW8 73 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 M0QZ24 198 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 TFPI2P48307 235 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 PKIAP61925 76 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 DMRTA1Q5VZB9 504 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 ZNF664Q8N3J9 261 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 OR1N2Q8NGR9 330 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 DPF1Q92782 380 aa7.2□□□□□ -1.26
TRIM55-201ENST00000276573 M0R2Z0 102 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 RNASE4P34096 147 aaKnown RBP7.19□□□□□ -1.26
TRIM55-201ENST00000276573 KRTDAPP60985 99 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 SNAI2O43623 268 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 OR5AL1P0C617 328 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 ZNF688P0C7X2 276 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 KIR3DS1Q14943 382 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 WFDC12Q8WWY7 111 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 PRO1933Q9H354 126 aa7.19□□□□□ -1.26
TRIM55-201ENST00000276573 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 D6R8Y8 96 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 CSN3P07498 182 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 RAB4AP20338 218 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 SNRPD3P62318 126 aaKnown RBP7.18□□□□□ -1.26
TRIM55-201ENST00000276573 PSMG4Q5JS54 123 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 ORMDL3Q8N138 153 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 Q8N976 141 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
TRIM55-201ENST00000276573 HELZ2Q9BYK8 2649 aaKnown RBP7.18□□□□□ -1.26
TRIM55-201ENST00000276573 A0A0J9YX75 114 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 KLLNB2CW77 178 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 TSTD3H0UI37 97 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 RNASE1P07998 156 aaKnown RBP7.17□□□□□ -1.26
TRIM55-201ENST00000276573 SCGB2A2Q13296 93 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
TRIM55-201ENST00000276573 KHDC1LQ5JSQ8 128 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms