RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 NBL1P41271 181 aa17.04■□□□□ 0.32
CDR2-201ENST00000268383 COTL1Q14019 142 aa17.04■□□□□ 0.32
CDR2-201ENST00000268383 AJUBAQ96IF1 538 aa17.04■□□□□ 0.32
CDR2-201ENST00000268383 DPF1Q92782 380 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 SIRPDQ9H106 197 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 UFC1Q9Y3C8 167 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 IGHV3OR16-10A0A075B7F0 116 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 ODF1Q14990 250 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 AP1S3Q96PC3 154 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 FOXC2Q99958 501 aa17.03■□□□□ 0.32
CDR2-201ENST00000268383 TRAV8-2A0A0B4J237 113 aa17.02■□□□□ 0.32
CDR2-201ENST00000268383 SAA4P35542 130 aa17.02■□□□□ 0.32
CDR2-201ENST00000268383 GTSCR1Q86UQ5 136 aa17.02■□□□□ 0.32
CDR2-201ENST00000268383 TMEM219Q86XT9 240 aa17.02■□□□□ 0.32
CDR2-201ENST00000268383 C9orf118A6NHY6 69 aa17.02■□□□□ 0.31
CDR2-201ENST00000268383 DEFB1P60022 68 aa17.02■□□□□ 0.31
CDR2-201ENST00000268383 FAM110DQ8TAY7 271 aaPredicted RBP17.02■□□□□ 0.31
CDR2-201ENST00000268383 IGF1P05019 195 aa17.01■□□□□ 0.31
CDR2-201ENST00000268383 HSD52Q0P140 79 aa17.01■□□□□ 0.31
CDR2-201ENST00000268383 LINC01559Q495D7 138 aa17.01■□□□□ 0.31
CDR2-201ENST00000268383 CNFNQ9BYD5 112 aa17.01■□□□□ 0.31
CDR2-201ENST00000268383 HHLA3Q9XRX5 114 aa17.01■□□□□ 0.31
CDR2-201ENST00000268383 FCER1GP30273 86 aa17.01■□□□□ 0.31
CDR2-201ENST00000268383 A0A0G2JLM5 398 aa17■□□□□ 0.31
CDR2-201ENST00000268383 A6NDN8 102 aa17■□□□□ 0.31
CDR2-201ENST00000268383 SCGB2A1O75556 95 aa17■□□□□ 0.31
CDR2-201ENST00000268383 MINOS1Q5TGZ0 78 aa17■□□□□ 0.31
CDR2-201ENST00000268383 MINOS1-NBL1R4GNA1 71 aa17■□□□□ 0.31
CDR2-201ENST00000268383 AGRNO00468 2067 aa17■□□□□ 0.31
CDR2-201ENST00000268383 H3BRM9 83 aa17■□□□□ 0.31
CDR2-201ENST00000268383 SPG11Q96JI7 2443 aa17■□□□□ 0.31
CDR2-201ENST00000268383 GOSR1O95249 250 aa16.99■□□□□ 0.31
CDR2-201ENST00000268383 GCSHP23434 173 aa16.99■□□□□ 0.31
CDR2-201ENST00000268383 OR9G4Q8NGQ1 327 aa16.99■□□□□ 0.31
CDR2-201ENST00000268383 RAXQ9Y2V3 346 aa16.99■□□□□ 0.31
CDR2-201ENST00000268383 K7ERJ3 54 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 PPBPP02775 128 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 FXYD2P54710 66 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 UFSP1Q6NVU6 142 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 C8orf86Q6ZUL3 223 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 TMEM160Q9NX00 188 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 PRR9Q5T870 116 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 C1orf122Q6ZSJ8 110 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 ARL6IP6Q8N6S5 226 aa16.98■□□□□ 0.31
CDR2-201ENST00000268383 IGHV7-4-1A0A0J9YVY3 117 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 UBTD1Q9HAC8 227 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 ABCA2Q9BZC7 2435 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 TMEM8BA6NDV4 472 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 OOSP1A8MZH6 123 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 EFNA4P52798 201 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 TMEM78Q5T7P6 136 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 ZC2HC1BQ5TFG8 222 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 OR2K2Q8NGT1 345 aa16.97■□□□□ 0.31
CDR2-201ENST00000268383 CRYBG3Q68DQ2 2970 aa16.96■□□□□ 0.31
CDR2-201ENST00000268383 IGLV2-18A0A075B6J9 118 aa16.96■□□□□ 0.31
CDR2-201ENST00000268383 TRAV40A0A0B4J280 105 aa16.96■□□□□ 0.31
CDR2-201ENST00000268383 SMIM17P0DL12 118 aa16.96■□□□□ 0.31
CDR2-201ENST00000268383 OR4X2Q8NGF9 303 aa16.96■□□□□ 0.31
CDR2-201ENST00000268383 NXT2Q9NPJ8 142 aaKnown RBP16.96■□□□□ 0.31
CDR2-201ENST00000268383 H3BVH4 76 aa16.96■□□□□ 0.3
CDR2-201ENST00000268383 MEGF9Q9H1U4 602 aa16.96■□□□□ 0.3
CDR2-201ENST00000268383 IGKCP01834 107 aa16.95■□□□□ 0.3
CDR2-201ENST00000268383 RIPPLY3P57055 190 aa16.95■□□□□ 0.3
CDR2-201ENST00000268383 CELSR2Q9HCU4 2923 aa16.95■□□□□ 0.3
CDR2-201ENST00000268383 SRSF2Q01130 221 aaKnown RBP16.95■□□□□ 0.3
CDR2-201ENST00000268383 BPESC1Q9GZL8 116 aa16.95■□□□□ 0.3
CDR2-201ENST00000268383 MRPL35Q9NZE8 188 aaKnown RBP16.95■□□□□ 0.3
CDR2-201ENST00000268383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.94■□□□□ 0.34e-8■■■□□ 15.2
CDR2-201ENST00000268383 Q8N8P6 123 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 NRACQ8N912 160 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 C20orf173Q96LM9 149 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 METTL26Q96S19 204 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 SLC50A1Q9BRV3 221 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 KLK15Q9H2R5 256 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 ZMAT4Q9H898 229 aa16.94■□□□□ 0.3
CDR2-201ENST00000268383 K7EP34 96 aa16.93■□□□□ 0.3
CDR2-201ENST00000268383 UBE2E1P51965 193 aa16.93■□□□□ 0.3
CDR2-201ENST00000268383 SPANXN1Q5VSR9 72 aa16.93■□□□□ 0.3
CDR2-201ENST00000268383 SIVA1O15304 175 aa16.93■□□□□ 0.3
CDR2-201ENST00000268383 LINC01546A6NGU7 62 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 TRBV12-3P01733 135 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 GTF2H5Q6ZYL4 71 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 COL25A1Q9BXS0 654 aaPredicted RBP16.92■□□□□ 0.3
CDR2-201ENST00000268383 CENPVL3A0A0U1RRI6 287 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 MAPKAPK5-AS1Q8N8E1 139 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 CHAC1Q9BUX1 264 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 SPCS1Q9Y6A9 102 aa16.92■□□□□ 0.3
CDR2-201ENST00000268383 IGKV3-7A0A075B6H7 116 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 RBAKDNA6NC62 111 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 EEF1AKMT3Q96AZ1 226 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 C16orf92Q96LL3 132 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 TRBV25-1A0A075B6N4 114 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 A0A1W2PPM0 123 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 K7ERU9 68 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 DEFB104AQ8WTQ1 72 aa16.91■□□□□ 0.3
CDR2-201ENST00000268383 UNQ9165/PRO28630Q6UXU0 137 aa16.9■□□□□ 0.3
CDR2-201ENST00000268383 DPM2O94777 84 aa16.9■□□□□ 0.3
CDR2-201ENST00000268383 M0R381 172 aa16.89■□□□□ 0.29
CDR2-201ENST00000268383 KLRB1Q12918 225 aa16.89■□□□□ 0.29
CDR2-201ENST00000268383 BRD3OSQ6XYD6 125 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms