RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 BLCAPP62952 87 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 LRBAP50851 2863 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 CTSGP08311 255 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 IGHV4-38-2P0DP08 117 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 FANCD2OSQ96PS1 177 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 MSRB1Q9NZV6 116 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 MRPL27Q9P0M9 148 aaKnown RBP9.83□□□□□ -0.84
HERC6-201ENST00000264346 F6UB75 175 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 SFTA2Q6UW10 78 aa9.83□□□□□ -0.84
HERC6-201ENST00000264346 A0A0G2JLM5 398 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 IGHV4-39P01824 125 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 RASL11AQ6T310 242 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 Q8N9W7 124 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 IGHV1-69DA0A0B4J2H0 117 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 IGHV1-24A0A0C4DH33 117 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 IGHV1-69P01742 117 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 CD7P09564 240 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 GDF5OSQ5U4N7 250 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 FAM110DQ8TAY7 271 aaPredicted RBP9.82□□□□□ -0.84
HERC6-201ENST00000264346 IFI27L1Q96BM0 104 aa9.82□□□□□ -0.84
HERC6-201ENST00000264346 IGLV11-55A0A075B6I3 123 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 TRAV26-2A0A0B4J265 109 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 RNF223E7ERA6 249 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 NDUFA3O95167 84 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 HBDP02042 147 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 CRYGCP07315 174 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 EGR2P11161 476 aaPredicted RBP9.81□□□□□ -0.84
HERC6-201ENST00000264346 ZNF56Q15929 161 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 SRSF8Q9BRL6 282 aaKnown RBP9.81□□□□□ -0.84
HERC6-201ENST00000264346 ASIPP42127 132 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 C12orf54Q6X4T0 127 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 CHCHD1Q96BP2 118 aaKnown RBP9.81□□□□□ -0.84
HERC6-201ENST00000264346 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 ZNF492Q9P255 531 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 ZNF256Q9Y2P7 627 aaPredicted RBP9.81□□□□□ -0.84
HERC6-201ENST00000264346 C14orf178Q8N769 122 aaPredicted RBP9.81□□□□□ -0.84
HERC6-201ENST00000264346 ITLN2Q8WWU7 325 aaPredicted RBP9.81□□□□□ -0.84
HERC6-201ENST00000264346 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
HERC6-201ENST00000264346 IGHV4-30-2A0A087WSY4 118 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 CENPVL3A0A0U1RRI6 287 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 CTRLP40313 264 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 Q71RC1 249 aaPredicted RBP9.8□□□□□ -0.84
HERC6-201ENST00000264346 TAX1BP3O14907 124 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 MSMBP08118 114 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 GATA1P15976 413 aaPredicted RBP9.8□□□□□ -0.84
HERC6-201ENST00000264346 PDE6HQ13956 83 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 SAMD13Q5VXD3 122 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 SP5Q6BEB4 398 aaPredicted RBP9.8□□□□□ -0.84
HERC6-201ENST00000264346 C8orf86Q6ZUL3 223 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 MRPS16Q9Y3D3 137 aaKnown RBP9.8□□□□□ -0.84
HERC6-201ENST00000264346 B4DSR2 109 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 Q8N976 141 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
HERC6-201ENST00000264346 BEX4Q9NWD9 120 aaPredicted RBP9.8□□□□□ -0.84
HERC6-201ENST00000264346 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.84
HERC6-201ENST00000264346 TTC9CQ8N5M4 171 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 PTPRBP23467 1997 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 BVES-AS1Q5T3Y7 98 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
HERC6-201ENST00000264346 ZFHX4Q86UP3 3567 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 TRBV7-1A0A0A6YYK4 115 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 A0A1B0GW15 77 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
HERC6-201ENST00000264346 FBXL19-AS1Q494R0 122 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 MRPL51Q4U2R6 128 aaKnown RBP9.79□□□□□ -0.84
HERC6-201ENST00000264346 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
HERC6-201ENST00000264346 A0A1W2PPR1 153 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 FOXE3Q13461 319 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 K7EP13 123 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 CIDEAO60543 219 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 NPYP01303 97 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 SYNJ2BPP57105 145 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 CFHR4Q92496 578 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
HERC6-201ENST00000264346 INS-IGF2F8WCM5 200 aa9.77□□□□□ -0.84
HERC6-201ENST00000264346 FAM104BQ5XKR9 115 aa9.77□□□□□ -0.84
HERC6-201ENST00000264346 PET117Q6UWS5 81 aa9.77□□□□□ -0.84
HERC6-201ENST00000264346 NPBQ8NG41 125 aa9.77□□□□□ -0.84
HERC6-201ENST00000264346 SCGB3A1Q96QR1 104 aa9.77□□□□□ -0.84
HERC6-201ENST00000264346 SPCS1Q9Y6A9 102 aa9.77□□□□□ -0.84
HERC6-201ENST00000264346 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 CT83Q5H943 113 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 GTSCR1Q86UQ5 136 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 EMP1P54849 157 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 TMEM158Q8WZ71 300 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 GFRA4Q9GZZ7 299 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 SIGLEC8Q9NYZ4 499 aa9.77□□□□□ -0.85
HERC6-201ENST00000264346 A0A087WWL8 130 aa9.76□□□□□ -0.85
HERC6-201ENST00000264346 IGHV3-73A0A0B4J1V6 119 aa9.76□□□□□ -0.85
HERC6-201ENST00000264346 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
HERC6-201ENST00000264346 A6NDN8 102 aa9.76□□□□□ -0.85
HERC6-201ENST00000264346 TRBV12-3P01733 135 aa9.76□□□□□ -0.85
HERC6-201ENST00000264346 WIPF2Q8TF74 440 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms