RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 RPL7P18124 248 aaKnown RBP12.34□□□□□ -0.43
LMNB1-201ENST00000261366 PDE6HQ13956 83 aa12.34□□□□□ -0.43
LMNB1-201ENST00000261366 PHLDA1Q8WV24 401 aaPredicted RBP12.34□□□□□ -0.43
LMNB1-201ENST00000261366 SIGMAR1Q99720 223 aa12.34□□□□□ -0.43
LMNB1-201ENST00000261366 IGLL5B9A064 214 aa12.33□□□□□ -0.44
LMNB1-201ENST00000261366 SHISA9B4DS77 424 aa12.33□□□□□ -0.44
LMNB1-201ENST00000261366 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
LMNB1-201ENST00000261366 TNFRSF14Q92956 283 aa12.33□□□□□ -0.44
LMNB1-201ENST00000261366 GAGE12HA6NDE8 117 aa12.32□□□□□ -0.44
LMNB1-201ENST00000261366 FABP5P3A8MUU1 101 aa12.32□□□□□ -0.44
LMNB1-201ENST00000261366 CIDEAO60543 219 aa12.32□□□□□ -0.44
LMNB1-201ENST00000261366 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
LMNB1-201ENST00000261366 RAB1BQ9H0U4 201 aa12.32□□□□□ -0.44
LMNB1-201ENST00000261366 NXT2Q9NPJ8 142 aaKnown RBP12.32□□□□□ -0.44
LMNB1-201ENST00000261366 Q8NA96 180 aa12.32□□□□□ -0.44
LMNB1-201ENST00000261366 C11orf21Q9P2W6 132 aa12.32□□□□□ -0.44
LMNB1-201ENST00000261366 C12orf74Q32Q52 190 aa12.31□□□□□ -0.44
LMNB1-201ENST00000261366 MYOZ3Q8TDC0 251 aa12.31□□□□□ -0.44
LMNB1-201ENST00000261366 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
LMNB1-201ENST00000261366 SPAG8Q99932 426 aaPredicted RBP12.31□□□□□ -0.44
LMNB1-201ENST00000261366 SPANXB1Q9NS25 103 aaPredicted RBP12.31□□□□□ -0.44
LMNB1-201ENST00000261366 CYSLTR1Q9Y271 337 aa12.31□□□□□ -0.44
LMNB1-201ENST00000261366 IGLV11-55A0A075B6I3 123 aa12.3□□□□□ -0.44
LMNB1-201ENST00000261366 C5orf64Q2M2E5 130 aa12.3□□□□□ -0.44
LMNB1-201ENST00000261366 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
LMNB1-201ENST00000261366 ZMAT4Q9H898 229 aa12.3□□□□□ -0.44
LMNB1-201ENST00000261366 DPM3Q9P2X0 92 aa12.3□□□□□ -0.44
LMNB1-201ENST00000261366 MAP1AP78559 2803 aaPredicted RBP12.29□□□□□ -0.44
LMNB1-201ENST00000261366 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
LMNB1-201ENST00000261366 CTSGP08311 255 aa12.29□□□□□ -0.44
LMNB1-201ENST00000261366 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
LMNB1-201ENST00000261366 CELSR1Q9NYQ6 3014 aa12.29□□□□□ -0.44
LMNB1-201ENST00000261366 ZFHX3Q15911 3703 aa12.29□□□□□ -0.44
LMNB1-201ENST00000261366 LY6LH3BQJ8 138 aa12.29□□□□□ -0.44
LMNB1-201ENST00000261366 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.28□□□□□ -0.44
LMNB1-201ENST00000261366 E9PLD3 99 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 ECSCRQ19T08 205 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 CD300EQ496F6 205 aaPredicted RBP12.28□□□□□ -0.44
LMNB1-201ENST00000261366 TTC9CQ8N5M4 171 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 IGF2RP11717 2491 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 SPANXN1Q5VSR9 72 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 ATP5LO75964 103 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 Q8N8P6 123 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
LMNB1-201ENST00000261366 A0A1B0GWB2 263 aa12.27□□□□□ -0.45
LMNB1-201ENST00000261366 LAGE3Q14657 143 aa12.27□□□□□ -0.45
LMNB1-201ENST00000261366 GAGE13Q4V321 117 aa12.27□□□□□ -0.45
LMNB1-201ENST00000261366 PTPRQQ9UMZ3 2332 aa12.27□□□□□ -0.45
LMNB1-201ENST00000261366 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
LMNB1-201ENST00000261366 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
LMNB1-201ENST00000261366 H3BVH4 76 aa12.26□□□□□ -0.45
LMNB1-201ENST00000261366 CLUHP3Q96NS8 147 aa12.26□□□□□ -0.45
LMNB1-201ENST00000261366 TGFAP01135 160 aa12.26□□□□□ -0.45
LMNB1-201ENST00000261366 AGPAT4-IT1Q9H0P7 198 aa12.26□□□□□ -0.45
LMNB1-201ENST00000261366 HIF1ANQ9NWT6 349 aa12.26□□□□□ -0.45
LMNB1-201ENST00000261366 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
LMNB1-201ENST00000261366 CLEC3BP05452 202 aa12.25□□□□□ -0.45
LMNB1-201ENST00000261366 C20orf78Q9BR46 151 aa12.25□□□□□ -0.45
LMNB1-201ENST00000261366 COL12A1Q99715 3063 aa12.25□□□□□ -0.45
LMNB1-201ENST00000261366 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
LMNB1-201ENST00000261366 F8W1H4 67 aa12.25□□□□□ -0.45
LMNB1-201ENST00000261366 J3QR89 54 aa12.25□□□□□ -0.45
LMNB1-201ENST00000261366 GRNP28799 593 aaKnown RBP12.25□□□□□ -0.45
LMNB1-201ENST00000261366 ZNF672Q499Z4 452 aaPredicted RBP12.25□□□□□ -0.45
LMNB1-201ENST00000261366 M0R381 172 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 CD3EP07766 207 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 EMP1P54849 157 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 DEFB1P60022 68 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 C15orf32Q32M92 178 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 LOC107984156A0A0G2JMH3 177 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 OR11H12B2RN74 326 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 IGF1P05019 195 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 ARL17AQ8IVW1 177 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 RNF5Q99942 180 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 VKORC1Q9BQB6 163 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
LMNB1-201ENST00000261366 PGPEP1Q9NXJ5 209 aa12.24□□□□□ -0.45
LMNB1-201ENST00000261366 ATRXP46100 2492 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 A0A087WX48 190 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 CLEC19AQ6UXS0 136 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 NRACQ8N912 160 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 ZNF418Q8TF45 676 aaPredicted RBP12.23□□□□□ -0.45
LMNB1-201ENST00000261366 FAM90A27PA6NNH2 459 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 SPOCK3Q9BQ16 436 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 MRPL16Q9NX20 251 aaKnown RBP12.23□□□□□ -0.45
LMNB1-201ENST00000261366 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
LMNB1-201ENST00000261366 HRNRQ86YZ3 2850 aaPredicted RBP12.23□□□□□ -0.45
LMNB1-201ENST00000261366 SPTAN1Q13813 2472 aaKnown RBP12.22□□□□□ -0.45
LMNB1-201ENST00000261366 B9A039 149 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 TMEM78Q5T7P6 136 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 SCGB3A1Q96QR1 104 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 K7ENP7 123 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 CEACAM3P40198 252 aa12.22□□□□□ -0.45
LMNB1-201ENST00000261366 SCGB1D4Q6XE38 83 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms