RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SMUG1Q53HV7 270 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 ODF3Q96PU9 254 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
CCDC115-201ENST00000259229 BIN3Q9NQY0 253 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
CCDC115-201ENST00000259229 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
CCDC115-201ENST00000259229 H3BMM0 161 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 PPP1R2P9O14990 202 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
CCDC115-201ENST00000259229 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 SMCO4Q9NRQ5 59 aa13.13□□□□□ -0.31
CCDC115-201ENST00000259229 DNHD1Q96M86 4753 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 KLLNB2CW77 178 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 SH2D1AO60880 128 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 ACTL10Q5JWF8 245 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 Q6ZQT7 251 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 C15orf54Q8N8G6 183 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 TUBA4BQ9H853 241 aa13.12□□□□□ -0.31
CCDC115-201ENST00000259229 OR11H12B2RN74 326 aa13.11□□□□□ -0.31
CCDC115-201ENST00000259229 DUSP14O95147 198 aaKnown RBP13.11□□□□□ -0.31
CCDC115-201ENST00000259229 CA1P00915 261 aaPredicted RBP13.11□□□□□ -0.31
CCDC115-201ENST00000259229 WFDC10AQ9H1F0 79 aa13.11□□□□□ -0.31
CCDC115-201ENST00000259229 ANK2Q01484 3957 aa13.11□□□□□ -0.31
CCDC115-201ENST00000259229 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
CCDC115-201ENST00000259229 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
CCDC115-201ENST00000259229 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
CCDC115-201ENST00000259229 ZNF575Q86XF7 245 aa13.1□□□□□ -0.31
CCDC115-201ENST00000259229 OR4B1Q8NGF8 309 aa13.1□□□□□ -0.31
CCDC115-201ENST00000259229 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
CCDC115-201ENST00000259229 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
CCDC115-201ENST00000259229 PFN1P07737 140 aaKnown RBP13.1□□□□□ -0.31
CCDC115-201ENST00000259229 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
CCDC115-201ENST00000259229 C11orf21Q9P2W6 132 aa13.1□□□□□ -0.31
CCDC115-201ENST00000259229 P01737 135 aa13.09□□□□□ -0.31
CCDC115-201ENST00000259229 RPL19P84098 196 aaKnown RBP13.09□□□□□ -0.31
CCDC115-201ENST00000259229 ELOBQ15370 118 aa13.09□□□□□ -0.31
CCDC115-201ENST00000259229 IL36BQ9NZH7 164 aa13.09□□□□□ -0.31
CCDC115-201ENST00000259229 URGCP-MRPS24S4R325 110 aa13.09□□□□□ -0.31
CCDC115-201ENST00000259229 J3KRW8 73 aa13.08□□□□□ -0.32
CCDC115-201ENST00000259229 M0R2Z0 102 aa13.08□□□□□ -0.32
CCDC115-201ENST00000259229 CT83Q5H943 113 aa13.08□□□□□ -0.32
CCDC115-201ENST00000259229 Q6AWC8 147 aa13.08□□□□□ -0.32
CCDC115-201ENST00000259229 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
CCDC115-201ENST00000259229 CMC4P56277 68 aaPredicted RBP13.07□□□□□ -0.32
CCDC115-201ENST00000259229 SPINK13Q1W4C9 94 aa13.07□□□□□ -0.32
CCDC115-201ENST00000259229 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
CCDC115-201ENST00000259229 DAZAP1Q96EP5 407 aaKnown RBP13.07□□□□□ -0.32
CCDC115-201ENST00000259229 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
CCDC115-201ENST00000259229 SMIM27A0A1W2PRY6 76 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 COLCA2A8K830 154 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 LEPP41159 167 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 GFI1BQ5VTD9 330 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 CRXO43186 299 aaPredicted RBP13.06□□□□□ -0.32
CCDC115-201ENST00000259229 GPX1P07203 203 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 CXCL1P09341 107 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 CDKN1BP46527 198 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 FAM3BP58499 235 aaPredicted RBP13.06□□□□□ -0.32
CCDC115-201ENST00000259229 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 OR2D3Q8NGH3 330 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 GTSF1Q8WW33 167 aa13.06□□□□□ -0.32
CCDC115-201ENST00000259229 CMYA5Q8N3K9 4069 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 IGKV3D-20A0A0C4DH25 116 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 GZMBP10144 247 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
CCDC115-201ENST00000259229 OXLD1Q5BKU9 147 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 PRR31Q5SQ13 230 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
CCDC115-201ENST00000259229 PKD1L1Q8TDX9 2849 aa13.04□□□□□ -0.32
CCDC115-201ENST00000259229 NOTCH3Q9UM47 2321 aa13.04□□□□□ -0.32
CCDC115-201ENST00000259229 TGIF2-C20orf24A0A0A6YYL0 155 aa13.04□□□□□ -0.32
CCDC115-201ENST00000259229 ZNF324O75467 553 aaPredicted RBP13.04□□□□□ -0.32
CCDC115-201ENST00000259229 TCL1AP56279 114 aa13.04□□□□□ -0.32
CCDC115-201ENST00000259229 FXYD7P58549 80 aa13.04□□□□□ -0.32
CCDC115-201ENST00000259229 NEU1Q99519 415 aa13.04□□□□□ -0.32
CCDC115-201ENST00000259229 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
CCDC115-201ENST00000259229 C7orf71A4D174 169 aa13.03□□□□□ -0.32
CCDC115-201ENST00000259229 RBMY1A1P0DJD3 496 aaKnown RBP13.03□□□□□ -0.32
CCDC115-201ENST00000259229 RBMY1CP0DJD4 496 aa13.03□□□□□ -0.32
CCDC115-201ENST00000259229 RBMY1FQ15415 496 aaKnown RBP13.03□□□□□ -0.32
CCDC115-201ENST00000259229 STHQ8IWL8 128 aa13.03□□□□□ -0.32
CCDC115-201ENST00000259229 Q8N1Y9 231 aa13.03□□□□□ -0.32
CCDC115-201ENST00000259229 TRBV24-1A0A075B6N3 115 aa13.02□□□□□ -0.32
CCDC115-201ENST00000259229 TMEM189A5PLL7 270 aa13.02□□□□□ -0.32
CCDC115-201ENST00000259229 TSPOP30536 169 aa13.02□□□□□ -0.32
CCDC115-201ENST00000259229 DEFB125Q8N687 156 aa13.02□□□□□ -0.32
CCDC115-201ENST00000259229 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.02□□□□□ -0.32
CCDC115-201ENST00000259229 TMSB15BA0A087X1C1 80 aa13.02□□□□□ -0.33
CCDC115-201ENST00000259229 A0A1W2PPQ1 181 aa13.02□□□□□ -0.33
CCDC115-201ENST00000259229 A8MWL6 223 aa13.02□□□□□ -0.33
CCDC115-201ENST00000259229 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.33
CCDC115-201ENST00000259229 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
CCDC115-201ENST00000259229 GFRA4Q9GZZ7 299 aa13.02□□□□□ -0.33
CCDC115-201ENST00000259229 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
CCDC115-201ENST00000259229 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
CCDC115-201ENST00000259229 ORM1P02763 201 aa13.01□□□□□ -0.33
CCDC115-201ENST00000259229 S100PP25815 95 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms