RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ZNF833PQ6ZTB9 187 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 DLX4Q92988 240 aaPredicted RBP9.73□□□□□ -0.85
USP30-201ENST00000257548 MRAP2Q96G30 205 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 SHANK2-AS3Q9BTD1 123 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 ADAMTS20P59510 1910 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 CCDC144NLQ6NUI1 221 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 DPF1Q92782 380 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 PRO3102Q9H379 93 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 PLSCR4Q9NRQ2 329 aa9.73□□□□□ -0.85
USP30-201ENST00000257548 IGHV1-3A0A0C4DH29 117 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 UFSP1Q6NVU6 142 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 THAP8Q8NA92 274 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 PRR25Q96S07 402 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 SPTBN4Q9H254 2564 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 A8MWV9 139 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 DTX2Q86UW9 622 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 KLHL30-AS1Q8NEE0 82 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 LINC00527Q9UJ94 153 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 SLC25A16P16260 332 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 WT1P19544 449 aaPredicted RBP9.72□□□□□ -0.85
USP30-201ENST00000257548 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP30-201ENST00000257548 C16orf54Q6UWD8 224 aa9.72□□□□□ -0.85
USP30-201ENST00000257548 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
USP30-201ENST00000257548 NDPQ00604 133 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 GFRALQ6UXV0 394 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 FAM90A27PA6NNH2 459 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 CRIP1P50238 77 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 NPC2P61916 151 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 KLRD1Q13241 179 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 C3orf56Q8N813 242 aa9.71□□□□□ -0.85
USP30-201ENST00000257548 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.85
USP30-201ENST00000257548 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
USP30-201ENST00000257548 C9JAW5 83 aa9.71□□□□□ -0.86
USP30-201ENST00000257548 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
USP30-201ENST00000257548 SIGLEC15Q6ZMC9 328 aa9.71□□□□□ -0.86
USP30-201ENST00000257548 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
USP30-201ENST00000257548 PRSS29PA6NIE9 313 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 GAGE2BQ13066 116 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 GAGE2EQ4V326 116 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 CLEC19AQ6UXS0 136 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 GAGE2DQ9UEU5 116 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 PTPRQQ9UMZ3 2332 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 ODF1Q14990 250 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 SIVA1O15304 175 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 MT-ATP8P03928 68 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 MAPKAPK5-AS1Q8N8E1 139 aa9.7□□□□□ -0.86
USP30-201ENST00000257548 RRN3P1Q2M238 152 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 ASCL5Q7RTU5 278 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 ABHD17AQ96GS6 310 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 SPANXB1Q9NS25 103 aaPredicted RBP9.69□□□□□ -0.86
USP30-201ENST00000257548 PCSK5Q92824 1860 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 CGB3P0DN86 165 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 CGB7P0DN87 165 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
USP30-201ENST00000257548 PVRIGQ6DKI7 326 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 TMEM155Q4W5P6 130 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 RAB1BQ9H0U4 201 aa9.69□□□□□ -0.86
USP30-201ENST00000257548 TMEM178BH3BS89 294 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 TRGV3P03979 118 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 TIMD4Q96H15 378 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 IGLV1-44P01699 117 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 TMEM30BQ3MIR4 351 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 NBR2O15453 112 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 ZNF80P51504 273 aaPredicted RBP9.68□□□□□ -0.86
USP30-201ENST00000257548 ZFP2Q6ZN57 461 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 PRSS33Q8NF86 280 aa9.68□□□□□ -0.86
USP30-201ENST00000257548 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 H7C1H1 209 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 LHBP01229 141 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 SRD5A1P18405 259 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 ADIPOQQ15848 244 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 C22orf34Q6ZV56 151 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 RNF183Q96D59 192 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 IGHV3OR16-10A0A075B7F0 116 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 MYCNOSP40205 109 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 DPM3Q9P2X0 92 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 COL5A1P20908 1838 aaPredicted RBP9.67□□□□□ -0.86
USP30-201ENST00000257548 IGLV3-9A0A075B6K5 115 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 A0A096LNJ9 63 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 LINC01560Q8TB33 94 aa9.67□□□□□ -0.86
USP30-201ENST00000257548 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 LOXP28300 417 aaPredicted RBP9.66□□□□□ -0.86
USP30-201ENST00000257548 ZNF48Q96MX3 618 aaPredicted RBP9.66□□□□□ -0.86
USP30-201ENST00000257548 CTSZQ9UBR2 303 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 PLNP26678 52 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
USP30-201ENST00000257548 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 RNASE6Q93091 150 aaKnown RBP9.66□□□□□ -0.86
USP30-201ENST00000257548 UBTD1Q9HAC8 227 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 TRAV12-3A0A0B4J271 114 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 BUB1B-PAK6H3BSN5 160 aa9.66□□□□□ -0.86
USP30-201ENST00000257548 CDX4O14627 284 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms