RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 BCL6BQ8N143 479 aaPredicted RBP10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 K7EIM0 57 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 IGLV2-23P01705 113 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 Q6ZRM9 215 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 ATP6V0E2Q8NHE4 81 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 TMEM170AQ8WVE7 144 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 NOP10Q9NPE3 64 aaKnown RBP10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 A0A0G2JRQ6 117 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 CCL25O15444 150 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 DERL1Q9BUN8 251 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 U3KQE9 123 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 KIF26BQ2KJY2 2108 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 SSBP2P81877 361 aaPredicted RBP10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 KLK9Q9UKQ9 250 aa10.42□□□□□ -0.74
PRPF38A-201ENST00000257181 CTSGP08311 255 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 IFI27L1Q96BM0 104 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 DEFB136Q30KP8 78 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 TMEM95Q3KNT9 176 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 Q8N8P6 123 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 PRR20EP86478 221 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 PRR20CP86479 221 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 PRR20DP86480 221 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 PRR20BP86481 221 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 PRR20AP86496 221 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 ZNF747Q9BV97 191 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 SPANXA1Q9NS26 97 aa10.41□□□□□ -0.74
PRPF38A-201ENST00000257181 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 CBLN2Q8IUK8 224 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 SMIM13P0DJ93 91 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 SIGLEC8Q9NYZ4 499 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 PAX2Q02962 417 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 SPRNQ5BIV9 151 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 HEATR1Q9H583 2144 aaKnown RBP10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
PRPF38A-201ENST00000257181 LRRK1Q38SD2 2015 aa10.4□□□□□ -0.75
PRPF38A-201ENST00000257181 H3BQ85 93 aa10.4□□□□□ -0.75
PRPF38A-201ENST00000257181 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.75
PRPF38A-201ENST00000257181 BUB3O43684 328 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 IGKV1-39P01597 117 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 IGKV1D-39P04432 117 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 TEX22C9J3V5 150 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 ZNF581Q9P0T4 197 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 DNAJC13O75165 2243 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 TRBV10-1A0A0K0K1A3 114 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 ANGP03950 147 aaKnown RBP10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 CHAC1Q9BUX1 264 aa10.39□□□□□ -0.75
PRPF38A-201ENST00000257181 CXCL5P42830 114 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 D6R8Y8 96 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 LINC01551Q86U37 167 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 C11orf52Q96A22 123 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 TRBV24-1A0A075B6N3 115 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 C8orf49Q96NF6 230 aa10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 FGF23Q9GZV9 251 aaPredicted RBP10.38□□□□□ -0.75
PRPF38A-201ENST00000257181 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 CYTL1Q9NRR1 136 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 LRP4O75096 1905 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 A0A087WWL8 130 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 KIAA1644Q3SXP7 199 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 LINC01006Q8NI28 216 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 LOC107984156A0A0G2JMH3 177 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 ARL17AQ8IVW1 177 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 VSIRQ9H7M9 311 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 ZNF702PQ9H963 129 aa10.37□□□□□ -0.75
PRPF38A-201ENST00000257181 LY6LH3BQJ8 138 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 BRI3O95415 125 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 KLF12Q9Y4X4 402 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 MAP6D1Q9H9H5 199 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 MRPL36Q9P0J6 103 aaKnown RBP10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 CFHR3Q02985 330 aa10.36□□□□□ -0.75
PRPF38A-201ENST00000257181 TSPAN13O95857 204 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 FAM104BQ5XKR9 115 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 AMN1Q8IY45 258 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 LINC00518Q8N0U6 118 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 NUP35Q8NFH5 326 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 GYPEP15421 78 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 LGALS9BQ3B8N2 356 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 COL6A6A6NMZ7 2263 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 SDHAF1A6NFY7 115 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 LTAP01374 205 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 LINC00205P59089 165 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 PMVKQ15126 192 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms