RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 ACYP1P07311 99 aa8.75□□□□□ -1.01
DCLK1-201ENST00000255448 DTX2Q86UW9 622 aa8.75□□□□□ -1.01
DCLK1-201ENST00000255448 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
DCLK1-201ENST00000255448 ATOX1O00244 68 aa8.74□□□□□ -1.01
DCLK1-201ENST00000255448 C5orf64Q2M2E5 130 aa8.74□□□□□ -1.01
DCLK1-201ENST00000255448 NDUFV3P56181 108 aaKnown RBP8.74□□□□□ -1.01
DCLK1-201ENST00000255448 ROS1P08922 2347 aa8.74□□□□□ -1.01
DCLK1-201ENST00000255448 CADP27708 2225 aa8.74□□□□□ -1.01
DCLK1-201ENST00000255448 TMEM14BQ9NUH8 114 aa8.74□□□□□ -1.01
DCLK1-201ENST00000255448 CHCHD5Q9BSY4 110 aa8.74□□□□□ -1.01
DCLK1-201ENST00000255448 FER1L5A0AVI2 2057 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 LY6G6EA0A0G2JKS1 128 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 H3BUX3 64 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 LTAP01374 205 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 C15orf32Q32M92 178 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 LINC01356Q8N9X3 169 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 U3KQA8 63 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 GATA3P23771 443 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 NDPQ00604 133 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 PDE6HQ13956 83 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 BUB1B-PAK6H3BSN5 160 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 MYO7BQ6PIF6 2116 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 HTN3P15516 51 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 USMG5Q96IX5 58 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
DCLK1-201ENST00000255448 IGKV1D-17A0A075B6S4 117 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 BRK1Q8WUW1 75 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 FXYD5Q96DB9 178 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 LINC00477Q96M19 166 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 TRBV7-1A0A0A6YYK4 115 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.72□□□□□ -1.01
DCLK1-201ENST00000255448 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 DTX1Q86Y01 620 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 ATP6V0E2Q8NHE4 81 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 HIGD1BQ9P298 99 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 MYLKQ15746 1914 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 A0A1W2PPI3 338 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 E7EQL1 145 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 LINC01620Q4KN68 170 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 PIP4P1Q86T03 277 aa8.72□□□□□ -1.01
DCLK1-201ENST00000255448 NSUN5P1Q3KNT7 163 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 TMEM219Q86XT9 240 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRR25Q96S07 402 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRB1P04280 392 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRR20EP86478 221 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRR20CP86479 221 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRR20DP86480 221 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRR20BP86481 221 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 PRR20AP86496 221 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 SP5Q6BEB4 398 aaPredicted RBP8.71□□□□□ -1.01
DCLK1-201ENST00000255448 SHANK1Q9Y566 2161 aa8.71□□□□□ -1.01
DCLK1-201ENST00000255448 BPESC1Q9GZL8 116 aa8.71□□□□□ -1.02
DCLK1-201ENST00000255448 LINC00527Q9UJ94 153 aa8.71□□□□□ -1.02
DCLK1-201ENST00000255448 ARTNQ5T4W7 220 aa8.71□□□□□ -1.02
DCLK1-201ENST00000255448 C9orf139Q6ZV77 190 aa8.71□□□□□ -1.02
DCLK1-201ENST00000255448 KNCNA6PVL3 124 aa8.71□□□□□ -1.02
DCLK1-201ENST00000255448 SIGLEC9Q9Y336 463 aa8.71□□□□□ -1.02
DCLK1-201ENST00000255448 NOTCH3Q9UM47 2321 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 INS-IGF2F8WCM5 200 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 INSP01308 110 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 SPANXB1Q9NS25 103 aaPredicted RBP8.7□□□□□ -1.02
DCLK1-201ENST00000255448 COL4A6Q14031 1691 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 FAM223BA6NKX1 122 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 COL8A2P25067 703 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 FAM223AQ8IWN6 122 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 BRD3OSQ6XYD6 125 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 PRSS33Q8NF86 280 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 ZNRD1Q9P1U0 126 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 C2orf70A6NJV1 201 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 J3QKU1 62 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 KLHL30-AS1Q8NEE0 82 aa8.7□□□□□ -1.02
DCLK1-201ENST00000255448 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 C11orf44Q8N8P7 122 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 A4D1N5 150 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
DCLK1-201ENST00000255448 GATA4P43694 442 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 Q8TCH9 128 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 TRPT1Q86TN4 253 aaKnown RBP8.69□□□□□ -1.02
DCLK1-201ENST00000255448 NDUFA4L2Q9NRX3 87 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 SHISA9B4DS77 424 aa8.69□□□□□ -1.02
DCLK1-201ENST00000255448 MSMBP08118 114 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 PRR30Q53SZ7 412 aaPredicted RBP8.68□□□□□ -1.02
DCLK1-201ENST00000255448 RNF114Q9Y508 228 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 ARFGEF3Q5TH69 2177 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 WISP1O95388 367 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 LYPD2Q6UXB3 125 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 PFN2P35080 140 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 SAA4P35542 130 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 TICRRQ7Z2Z1 1910 aa8.68□□□□□ -1.02
DCLK1-201ENST00000255448 RPL36AP83881 106 aaKnown RBP8.67□□□□□ -1.02
DCLK1-201ENST00000255448 RPL36ALQ969Q0 106 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms