RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 PTPRDP23468 1912 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 PFN2P35080 140 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 TRBV7-1A0A0A6YYK4 115 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGHG2P01859 326 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 PF4P02776 101 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 BSPH1Q075Z2 132 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 Q6ZUT4 128 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 C1orf147Q96MC9 270 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 C8orf49Q96NF6 230 aa10.55□□□□□ -0.72
PCDHGA3-201ENST00000253812 ATP5J2P56134 94 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 PRB3Q04118 309 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 CD177Q8N6Q3 437 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 C9orf106Q8NAJ2 232 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 LINC01560Q8TB33 94 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 OOSP1A8MZH6 123 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 C5orf64Q2M2E5 130 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 NLRC5Q86WI3 1866 aa10.54□□□□□ -0.72
PCDHGA3-201ENST00000253812 H3BT86 120 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 DOCK7Q96N67 2140 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 ORMDL1Q9P0S3 153 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 ZNF407Q9C0G0 2248 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 PTPN13Q12923 2485 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGKV3D-7A0A0C4DH55 119 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 NDUFB8O95169 186 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 COLCA1Q6ZS62 124 aa10.53□□□□□ -0.72
PCDHGA3-201ENST00000253812 SHANK1Q9Y566 2161 aa10.52□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGHV1-46P01743 117 aa10.52□□□□□ -0.72
PCDHGA3-201ENST00000253812 IGKV1-16P04430 117 aa10.52□□□□□ -0.72
PCDHGA3-201ENST00000253812 METRNQ9UJH8 293 aa10.52□□□□□ -0.72
PCDHGA3-201ENST00000253812 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.72
PCDHGA3-201ENST00000253812 TRAV26-2A0A0B4J265 109 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 TRAV25A0A0B4J276 109 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 UQCRQO14949 82 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 CLPSP04118 112 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 LY6DQ14210 128 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 HOXD3P31249 432 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 TSC2P49815 1807 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 hADV29S1A0JD25 119 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 NDPQ00604 133 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 TMEM200BQ69YZ2 307 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 FAM168AQ92567 244 aa10.52□□□□□ -0.73
PCDHGA3-201ENST00000253812 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 TRBV10-2A0A0K0K1G8 114 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 A4D1N5 150 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 FAM120AOSQ5T036 256 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 M0R1W7 72 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 CMC4P56277 68 aaPredicted RBP10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
PCDHGA3-201ENST00000253812 PRR20EP86478 221 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 PRR20CP86479 221 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 PRR20DP86480 221 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 PRR20BP86481 221 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 PRR20AP86496 221 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 NDUFA4L2Q9NRX3 87 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 C22orf46C9J442 243 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 LTAP01374 205 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 Q0VFX4 171 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 IGHV1-18A0A0C4DH31 117 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 H0YGX0 51 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 K7EM74 188 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 HERVK_113P63121 156 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 IGHV1-69DA0A0B4J2H0 117 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 FHL1Q13642 323 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 C7orf69Q9H7B7 122 aa10.5□□□□□ -0.73
PCDHGA3-201ENST00000253812 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 PRSS22Q9GZN4 317 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 SPRR3Q9UBC9 169 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 LINC00527Q9UJ94 153 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 ANAPC1Q9H1A4 1944 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 CEP350Q5VT06 3117 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 CENPFP49454 3210 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 CRYGBP07316 175 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 ICOSQ9Y6W8 199 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 MINOS1Q5TGZ0 78 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 MINOS1-NBL1R4GNA1 71 aa10.49□□□□□ -0.73
PCDHGA3-201ENST00000253812 FOXL2NBQ6ZUU3 175 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 PCNX2A6NKB5 2137 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 DNAH12Q6ZR08 3092 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 PHF3Q92576 2039 aaKnown RBP10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 SRSF2Q01130 221 aaKnown RBP10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 RHPN1-AS1Q9BWJ2 59 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 FER1L5A0AVI2 2057 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 GGNQ86UU5 652 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 WFDC9Q8NEX5 89 aa10.48□□□□□ -0.73
PCDHGA3-201ENST00000253812 OTOGLQ3ZCN5 2332 aa10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
PCDHGA3-201ENST00000253812 SSC4DQ8WTU2 575 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms