RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 COA6Q5JTJ3 125 aaKnown RBP11.04□□□□□ -0.64
TARDBP-201ENST00000240185 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 DEFB105AQ8NG35 78 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
TARDBP-201ENST00000240185 SLX1AQ9BQ83 275 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 K7EN84 100 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 SAA4P35542 130 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 MP68P56378 58 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 TNS1Q9HBL0 1735 aaKnown RBP11.04□□□□□ -0.64
TARDBP-201ENST00000240185 FUSP35637 526 aaKnown RBP eCLIP11.04□□□□□ -0.643e-10■■□□□ 12.1
TARDBP-201ENST00000240185 DEFB121Q5J5C9 76 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 SCN5AQ14524 2016 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 H3BRN7 92 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 IGKV1-39P01597 117 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 IGKV1D-39P04432 117 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 TEX36Q5VZQ5 186 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 VWCEQ96DN2 955 aa11.04□□□□□ -0.64
TARDBP-201ENST00000240185 PKDREJQ9NTG1 2253 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 CACNA1HO95180 2353 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 CSRP2Q16527 193 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 TDRG1Q3Y452 100 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 FOXI1Q12951 378 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 ANKRD39Q53RE8 183 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 WIPF2Q8TF74 440 aaPredicted RBP11.03□□□□□ -0.64
TARDBP-201ENST00000240185 FXYD5Q96DB9 178 aa11.03□□□□□ -0.64
TARDBP-201ENST00000240185 DSCR9P59020 149 aa11.02□□□□□ -0.64
TARDBP-201ENST00000240185 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
TARDBP-201ENST00000240185 IGHV4-28A0A0C4DH34 117 aa11.02□□□□□ -0.65
TARDBP-201ENST00000240185 ANGP03950 147 aaKnown RBP11.02□□□□□ -0.65
TARDBP-201ENST00000240185 DYNAPQ8N1N2 210 aa11.02□□□□□ -0.65
TARDBP-201ENST00000240185 A4D1N5 150 aa11.01□□□□□ -0.65
TARDBP-201ENST00000240185 K7EM74 188 aa11.01□□□□□ -0.65
TARDBP-201ENST00000240185 DOCK7Q96N67 2140 aa11.01□□□□□ -0.65
TARDBP-201ENST00000240185 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
TARDBP-201ENST00000240185 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
TARDBP-201ENST00000240185 K7EMI3 77 aa11.01□□□□□ -0.65
TARDBP-201ENST00000240185 SRSF2Q01130 221 aaKnown RBP11.01□□□□□ -0.65
TARDBP-201ENST00000240185 CLPSL2Q6UWE3 100 aa11.01□□□□□ -0.65
TARDBP-201ENST00000240185 LTAP01374 205 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 VOPP1Q96AW1 172 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 G3V318 75 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 H0YGX0 51 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 COL8A2P25067 703 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 FXYD2P54710 66 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 WT1-ASQ06250 92 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 C8orf31Q8N9H6 132 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11□□□□□ -0.652e-9■■■■■ 39
TARDBP-201ENST00000240185 SLC25A29Q8N8R3 303 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 IGFBPL1Q8WX77 278 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 RGPD3A6NKT7 1758 aaPredicted RBP11□□□□□ -0.65
TARDBP-201ENST00000240185 RGPD4Q7Z3J3 1758 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 NUPR1O60356 82 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 ZFP36L1Q07352 338 aaKnown RBP11□□□□□ -0.65
TARDBP-201ENST00000240185 MUSTN1Q8IVN3 82 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 C14orf132Q9NPU4 83 aa11□□□□□ -0.65
TARDBP-201ENST00000240185 LY6HO94772 140 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 RHOHQ15669 191 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 LINC01545Q5VT33 79 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 IGHV4-4A0A075B6R2 117 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 FOXL2NBQ6ZUU3 175 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 HERV-K104P63124 156 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 XCL1P47992 114 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 TRAV4A0A0B4J268 109 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 G3V4G9 280 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 LINC00173Q6ZV60 143 aa10.99□□□□□ -0.65
TARDBP-201ENST00000240185 COL11A1P12107 1806 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-201ENST00000240185 LMO1P25800 156 aa10.98□□□□□ -0.65
TARDBP-201ENST00000240185 MRPL55Q7Z7F7 128 aaKnown RBP10.98□□□□□ -0.65
TARDBP-201ENST00000240185 CLPSP04118 112 aa10.98□□□□□ -0.65
TARDBP-201ENST00000240185 CRYGBP07316 175 aa10.98□□□□□ -0.65
TARDBP-201ENST00000240185 NREPQ16612 68 aa10.98□□□□□ -0.65
TARDBP-201ENST00000240185 C1orf147Q96MC9 270 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-201ENST00000240185 SHANK1Q9Y566 2161 aa10.98□□□□□ -0.65
TARDBP-201ENST00000240185 A0A096LPF7 62 aa10.98□□□□□ -0.65
TARDBP-201ENST00000240185 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-201ENST00000240185 GATA1P15976 413 aaPredicted RBP10.98□□□□□ -0.65
TARDBP-201ENST00000240185 ZNF134P52741 427 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 MDS2Q8NDY4 140 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-201ENST00000240185 IGKV2-29A2NJV5 120 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-201ENST00000240185 ZNF833PQ6ZTB9 187 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 SPTSSBQ8NFR3 76 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 LYPD6BQ8NI32 183 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 COX7B2Q8TF08 81 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PRR20EP86478 221 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PRR20CP86479 221 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PRR20DP86480 221 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PRR20BP86481 221 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PRR20AP86496 221 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 VSIG2Q96IQ7 327 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 NDUFA4O00483 81 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 SND1-IT1Q9HBX3 110 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PLCE1Q9P212 2302 aa10.97□□□□□ -0.65
TARDBP-201ENST00000240185 PHF3Q92576 2039 aaKnown RBP10.97□□□□□ -0.65
TARDBP-201ENST00000240185 CGB7P0DN87 165 aa10.96□□□□□ -0.65
TARDBP-201ENST00000240185 PSME4Q14997 1843 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms