RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PPIFP30405 207 aaKnown RBP16.8■□□□□ 0.28
SMARCD2-201ENST00000225742 C11orf21Q9P2W6 132 aa16.8■□□□□ 0.28
SMARCD2-201ENST00000225742 MPV17L2Q567V2 206 aa16.8■□□□□ 0.28
SMARCD2-201ENST00000225742 BVES-AS1Q5T3Y7 98 aa16.8■□□□□ 0.28
SMARCD2-201ENST00000225742 TACC2O95359 2948 aa16.79■□□□□ 0.28
SMARCD2-201ENST00000225742 PRSS47A8MTI9 375 aa16.79■□□□□ 0.28
SMARCD2-201ENST00000225742 SNAI2O43623 268 aa16.79■□□□□ 0.28
SMARCD2-201ENST00000225742 NUDT3O95989 172 aa16.79■□□□□ 0.28
SMARCD2-201ENST00000225742 FCER1GP30273 86 aa16.79■□□□□ 0.28
SMARCD2-201ENST00000225742 DEFB125Q8N687 156 aa16.79■□□□□ 0.28
SMARCD2-201ENST00000225742 LINC00527Q9UJ94 153 aa16.78■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHV7-4-1A0A0J9YVY3 117 aa16.77■□□□□ 0.28
SMARCD2-201ENST00000225742 IGHV4-38-2P0DP08 117 aa16.77■□□□□ 0.28
SMARCD2-201ENST00000225742 FOSL1P15407 271 aa16.77■□□□□ 0.28
SMARCD2-201ENST00000225742 Q8N8P6 123 aa16.77■□□□□ 0.28
SMARCD2-201ENST00000225742 MED13LQ71F56 2210 aa16.77■□□□□ 0.28
SMARCD2-201ENST00000225742 ATP5J2P56134 94 aa16.77■□□□□ 0.27
SMARCD2-201ENST00000225742 A0A0G2JLM5 398 aa16.76■□□□□ 0.27
SMARCD2-201ENST00000225742 MSMBP08118 114 aa16.76■□□□□ 0.27
SMARCD2-201ENST00000225742 ZNF580Q9UK33 172 aa16.76■□□□□ 0.27
SMARCD2-201ENST00000225742 H3BUX3 64 aa16.75■□□□□ 0.27
SMARCD2-201ENST00000225742 SOCS3O14543 225 aa16.75■□□□□ 0.27
SMARCD2-201ENST00000225742 OR10J6PQ8NGY7 276 aa16.75■□□□□ 0.27
SMARCD2-201ENST00000225742 C20orf173Q96LM9 149 aa16.75■□□□□ 0.27
SMARCD2-201ENST00000225742 SMAD7O15105 426 aaKnown RBP16.75■□□□□ 0.27
SMARCD2-201ENST00000225742 OR2K2Q8NGT1 345 aa16.75■□□□□ 0.27
SMARCD2-201ENST00000225742 TRBV7-9A0A0J9YWB2 115 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 TMEM8BA6NDV4 472 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 LEPP41159 167 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 DSCR9P59020 149 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 LY6EQ16553 131 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 UNQ9165/PRO28630Q6UXU0 137 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 TP73-AS1Q9UF72 201 aa16.74■□□□□ 0.27
SMARCD2-201ENST00000225742 IGHV4-30-2A0A087WSY4 118 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 UBE2V1Q13404 147 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 FOXE3Q13461 319 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 C2orf91Q6ZV80 131 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 GPHB5Q86YW7 130 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 ABCA2Q9BZC7 2435 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 SIVA1O15304 175 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 IGLV1-40P01703 118 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 TRBV12-3P01733 135 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 FGF6P10767 208 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 GATA3P23771 443 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 ANKRD39Q53RE8 183 aa16.73■□□□□ 0.27
SMARCD2-201ENST00000225742 TRAV21A0A0B4J279 112 aa16.72■□□□□ 0.27
SMARCD2-201ENST00000225742 CD5LO43866 347 aa16.72■□□□□ 0.27
SMARCD2-201ENST00000225742 SPANXN1Q5VSR9 72 aa16.72■□□□□ 0.27
SMARCD2-201ENST00000225742 BOD1L2Q8IYS8 172 aa16.72■□□□□ 0.27
SMARCD2-201ENST00000225742 OR4X2Q8NGF9 303 aa16.72■□□□□ 0.27
SMARCD2-201ENST00000225742 MRAP2Q96G30 205 aa16.72■□□□□ 0.27
SMARCD2-201ENST00000225742 IGLV2-18A0A075B6J9 118 aa16.71■□□□□ 0.27
SMARCD2-201ENST00000225742 MED14OSP0DP75 135 aa16.71■□□□□ 0.27
SMARCD2-201ENST00000225742 PF4V1P10720 104 aa16.71■□□□□ 0.27
SMARCD2-201ENST00000225742 PTTG1IPP53801 180 aa16.71■□□□□ 0.27
SMARCD2-201ENST00000225742 FXYD7P58549 80 aa16.71■□□□□ 0.27
SMARCD2-201ENST00000225742 OR9G4Q8NGQ1 327 aa16.71■□□□□ 0.27
SMARCD2-201ENST00000225742 B4DSR2 109 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 GAS8-AS1O95177 125 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 EVI2AP22794 236 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 ZFAND2AQ8N6M9 145 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 SPOCK3Q9BQ16 436 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 SMPXQ9UHP9 88 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 TAX1BP3O14907 124 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 SAMD13Q5VXD3 122 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 NRACQ8N912 160 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 FAM19A4Q96LR4 140 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 ZMAT4Q9H898 229 aa16.7■□□□□ 0.26
SMARCD2-201ENST00000225742 ATP5LO75964 103 aa16.69■□□□□ 0.26
SMARCD2-201ENST00000225742 SEC11AP67812 179 aa16.69■□□□□ 0.26
SMARCD2-201ENST00000225742 CFHR3Q02985 330 aa16.69■□□□□ 0.26
SMARCD2-201ENST00000225742 PRR9Q5T870 116 aa16.69■□□□□ 0.26
SMARCD2-201ENST00000225742 APRG1Q8IVJ8 170 aa16.69■□□□□ 0.26
SMARCD2-201ENST00000225742 SPTBN4Q9H254 2564 aa16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 K7EMT4 169 aa16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 TMEM97Q5BJF2 176 aa16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 KLK15Q9H2R5 256 aa16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 CCL25O15444 150 aa16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 GATA1P15976 413 aaPredicted RBP16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 UFC1Q9Y3C8 167 aa16.68■□□□□ 0.26
SMARCD2-201ENST00000225742 H3BVH4 76 aa16.67■□□□□ 0.26
SMARCD2-201ENST00000225742 IGHV3-11P01762 117 aa16.67■□□□□ 0.26
SMARCD2-201ENST00000225742 BLCAPP62952 87 aa16.67■□□□□ 0.26
SMARCD2-201ENST00000225742 LAGE3Q14657 143 aa16.67■□□□□ 0.26
SMARCD2-201ENST00000225742 TMEM158Q8WZ71 300 aa16.67■□□□□ 0.26
SMARCD2-201ENST00000225742 Q6ZVH6 145 aa16.66■□□□□ 0.26
SMARCD2-201ENST00000225742 DAZ1Q9NQZ3 744 aaKnown RBP16.66■□□□□ 0.26
SMARCD2-201ENST00000225742 ASIPP42127 132 aa16.66■□□□□ 0.26
SMARCD2-201ENST00000225742 ODF1Q14990 250 aa16.66■□□□□ 0.26
SMARCD2-201ENST00000225742 RHPN1-AS1Q9BWJ2 59 aa16.66■□□□□ 0.26
SMARCD2-201ENST00000225742 DKK2Q9UBU2 259 aa16.66■□□□□ 0.26
SMARCD2-201ENST00000225742 A1L4Q6 167 aa16.65■□□□□ 0.26
SMARCD2-201ENST00000225742 SLC25A16P16260 332 aa16.65■□□□□ 0.26
SMARCD2-201ENST00000225742 SRSF1Q07955 248 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMARCD2-201ENST00000225742 KIR3DS1Q14943 382 aa16.65■□□□□ 0.26
SMARCD2-201ENST00000225742 C18orf15Q96N68 181 aa16.65■□□□□ 0.26
SMARCD2-201ENST00000225742 TMEM89A2RUT3 159 aa16.64■□□□□ 0.25
SMARCD2-201ENST00000225742 PEF1Q9UBV8 284 aaKnown RBP16.64■□□□□ 0.25
SMARCD2-201ENST00000225742 PRSS1P07477 247 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 SMIM17P0DL12 118 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms