RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 A0A1B0GV72 72 aa15.61■□□□□ 0.09
PPP1R3F-201ENST00000055335 PHLDA1Q8WV24 401 aaPredicted RBP15.61■□□□□ 0.09
PPP1R3F-201ENST00000055335 CEACAM4O75871 244 aa15.61■□□□□ 0.09
PPP1R3F-201ENST00000055335 CCDC144NLQ6NUI1 221 aa15.61■□□□□ 0.09
PPP1R3F-201ENST00000055335 CFHR4Q92496 578 aa15.61■□□□□ 0.09
PPP1R3F-201ENST00000055335 SPANXN1Q5VSR9 72 aa15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 ZNF418Q8TF45 676 aaPredicted RBP15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 TNFRSF14Q92956 283 aa15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 E7EQL1 145 aa15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 IGLC6P0CF74 106 aa15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 RAB9AP51151 201 aa15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 PDE6HQ13956 83 aa15.6■□□□□ 0.09
PPP1R3F-201ENST00000055335 PLA2G2CQ5R387 149 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 C20orf78Q9BR46 151 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 E9PLD3 99 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 F8W1H4 67 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 CKS1BP61024 79 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 RAB1BQ9H0U4 201 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 HIGD1BQ9P298 99 aa15.59■□□□□ 0.09
PPP1R3F-201ENST00000055335 ATP5LO75964 103 aa15.58■□□□□ 0.09
PPP1R3F-201ENST00000055335 FANCD2OSQ96PS1 177 aa15.58■□□□□ 0.09
PPP1R3F-201ENST00000055335 ATP6V0BQ99437 205 aa15.58■□□□□ 0.09
PPP1R3F-201ENST00000055335 DEFB123Q8N688 67 aa15.58■□□□□ 0.08
PPP1R3F-201ENST00000055335 SCGB1D4Q6XE38 83 aa15.58■□□□□ 0.08
PPP1R3F-201ENST00000055335 MRPL16Q9NX20 251 aaKnown RBP15.58■□□□□ 0.08
PPP1R3F-201ENST00000055335 COL6A6A6NMZ7 2263 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 TNFRSF13BO14836 293 aaPredicted RBP15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 APOMO95445 188 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 C3orf36Q3SXR2 165 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 SMAD5-AS1Q9Y6J3 95 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 NDUFS8O00217 210 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 NDPQ00604 133 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 TM2D2Q9BX73 214 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 CEP295Q9C0D2 2601 aa15.57■□□□□ 0.08
PPP1R3F-201ENST00000055335 OR11H12B2RN74 326 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 LAGE3Q14657 143 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 OR11H1Q8NG94 326 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 OR11H2Q8NH07 326 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 VKORC1Q9BQB6 163 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 PGPEP1Q9NXJ5 209 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 CEACAM3P40198 252 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 EMP1P54849 157 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 SRSF9Q13242 221 aaKnown RBP eCLIP15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 ECSCRQ19T08 205 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 FAM57AQ8TBR7 257 aa15.56■□□□□ 0.08
PPP1R3F-201ENST00000055335 Q8N8P6 123 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 KAAG1Q9UBP8 84 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 DPM3Q9P2X0 92 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 M0R381 172 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 PSMB2P49721 201 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 ZNF502Q8TBZ5 544 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 ZMAT4Q9H898 229 aa15.55■□□□□ 0.08
PPP1R3F-201ENST00000055335 H3BVH4 76 aa15.54■□□□□ 0.08
PPP1R3F-201ENST00000055335 PTH2Q96A98 100 aa15.54■□□□□ 0.08
PPP1R3F-201ENST00000055335 C11orf21Q9P2W6 132 aa15.54■□□□□ 0.08
PPP1R3F-201ENST00000055335 IGKV3D-20A0A0C4DH25 116 aa15.54■□□□□ 0.08
PPP1R3F-201ENST00000055335 IGHG4P01861 327 aa15.54■□□□□ 0.08
PPP1R3F-201ENST00000055335 SYT8Q8NBV8 401 aa15.53■□□□□ 0.08
PPP1R3F-201ENST00000055335 RRN3P1Q2M238 152 aa15.53■□□□□ 0.08
PPP1R3F-201ENST00000055335 C5orf64Q2M2E5 130 aa15.53■□□□□ 0.08
PPP1R3F-201ENST00000055335 ZNF575Q86XF7 245 aa15.53■□□□□ 0.08
PPP1R3F-201ENST00000055335 SCGB3A1Q96QR1 104 aa15.53■□□□□ 0.08
PPP1R3F-201ENST00000055335 MAP1AP78559 2803 aaPredicted RBP15.52■□□□□ 0.08
PPP1R3F-201ENST00000055335 F8W735 103 aaPredicted RBP15.52■□□□□ 0.08
PPP1R3F-201ENST00000055335 HOXA3O43365 443 aaPredicted RBP15.52■□□□□ 0.08
PPP1R3F-201ENST00000055335 LINC01560Q8TB33 94 aa15.52■□□□□ 0.08
PPP1R3F-201ENST00000055335 CTSGP08311 255 aa15.52■□□□□ 0.07
PPP1R3F-201ENST00000055335 SMPXQ9UHP9 88 aa15.52■□□□□ 0.07
PPP1R3F-201ENST00000055335 GLMPQ8WWB7 406 aa15.52■□□□□ 0.07
PPP1R3F-201ENST00000055335 IGLV11-55A0A075B6I3 123 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 CLEC3BP05452 202 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 HLA-DRB4P13762 266 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 RAXQ9Y2V3 346 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 HLA-DRB4X5D2U9 266 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 TRAV26-1A0A087WT03 109 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 LINC01549A6NIU2 74 aa15.51■□□□□ 0.07
PPP1R3F-201ENST00000055335 A0A087WX48 190 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 MGPP08493 103 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 Q6ZS92 163 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 AGPAT4-IT1Q9H0P7 198 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 SRSF1Q07955 248 aaKnown RBP eCLIP15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 TMEM78Q5T7P6 136 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 IGKV3-7A0A075B6H7 116 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 SHISA9B4DS77 424 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 KLHL30-AS1Q8NEE0 82 aa15.5■□□□□ 0.07
PPP1R3F-201ENST00000055335 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.49■□□□□ 0.07
PPP1R3F-201ENST00000055335 ZNF815PA8K554 130 aa15.49■□□□□ 0.07
PPP1R3F-201ENST00000055335 ARL3P36405 182 aa15.49■□□□□ 0.07
PPP1R3F-201ENST00000055335 S100A4P26447 101 aaKnown RBP15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 C15orf32Q32M92 178 aa15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 ZFP2Q6ZN57 461 aa15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 CREBBPQ92793 2442 aa15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 MYMXA0A1B0GTQ4 84 aa15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 DEFB1P60022 68 aa15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 CLEC19AQ6UXS0 136 aa15.48■□□□□ 0.07
PPP1R3F-201ENST00000055335 SPINK8P0C7L1 97 aa15.47■□□□□ 0.07
PPP1R3F-201ENST00000055335 GEMIN7Q9H840 131 aaKnown RBP15.47■□□□□ 0.07
PPP1R3F-201ENST00000055335 H7C1H1 209 aa15.46■□□□□ 0.07
PPP1R3F-201ENST00000055335 C14orf178Q8N769 122 aaPredicted RBP15.46■□□□□ 0.07
PPP1R3F-201ENST00000055335 PIFOQ8TCI5 191 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms