RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Rhbdd1Q8BHC7 315 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Aadacl4Q8BM81 407 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tbx21Q9JKD8 530 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tusc2Q9WVF8 110 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ighv5-12-4A0A0A6YWG4 117 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 P04943 107 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rpl27aP14115 148 aaKnown RBP12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Dhrs2Q149L0 282 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr141Q60880 325 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr473Q8VG44 310 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ms4a3Q920C4 213 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Pgpep1lQ9CWB5 130 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Hspb9Q9DAM3 168 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Syngr2O55101 224 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ccl2P10148 148 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 IappP12968 93 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 FmodP50608 376 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rab5bP61021 215 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 MidnQ3TPJ7 465 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Q8C708 225 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 A730015C16RikQ8C992 119 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 Sgms2Q9D4B1 365 aa12.94□□□□□ -0.34
Trim39-203ENSMUST00000113706 P01806 116 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Zfp36l1P23950 338 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Reg2Q08731 173 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Slc16a13Q8CE94 428 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gpr132Q9Z282 382 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Cmya5Q70KF4 3739 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Cacna1iE9Q7P2 2199 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm10073E9Q3T0 114 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 SnrpeP62305 92 aaKnown RBP12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Crisp3Q03402 241 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Fam220aQ3ZN08 260 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 TpppQ7TQD2 218 aaKnown RBP12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Pgam5Q8BX10 288 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Phf13Q8K2W6 296 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 C1qtnf5Q8K479 243 aa12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Cyb5r3Q9DCN2 301 aaKnown RBP12.93□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ighv5-17A0A075B5R1 117 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm5108J3QP01 101 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr1154L7MU57 310 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Lgals9O08573 353 aaKnown RBP12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ren2P00796 401 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Spcs3Q6ZWQ7 180 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Vma21Q78T54 101 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Atoh7Q9Z2E5 149 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Trav6d-3A0A075B6B3 112 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Trbv26A0A0B4J1P5 115 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm5093E9PZB3 174 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rab33bO35963 229 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 MyocosQ3UWS6 143 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Trav6-3Q5R1E6 112 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Mrpl27Q99N92 148 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rpusd4Q9CWX4 377 aaKnown RBP12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Trex2Q9R1A9 236 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Vax2Q9WTP9 292 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 NbasE9Q411 2356 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Bmpr1bP36898 502 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Wnt10aP70701 417 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Zfp970Q08BU3 522 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Taar4Q5QD15 347 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Psmb6Q60692 238 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 9130230L23RikQ8CC80 163 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rab11fip5Q8R361 645 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ms4a4cQ9D3F6 226 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 H2al3Q9D4U4 128 aa12.92□□□□□ -0.34
Trim39-203ENSMUST00000113706 Znf431E9QAG8 526 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ifitm7G3X9Z2 141 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Degs1O09005 323 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Csn1s2bP02664 143 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Arl6ip6Q8BH07 226 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ankrd33Q8BXP5 385 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 ManbalQ9D8X0 85 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ctxnd1A0A1B0GST9 59 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 ShbgP97497 403 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Wdr83osQ6ZWX0 106 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Cbln4Q8BME9 198 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rbm14Q8C2Q3 669 aaKnown RBP12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Dmrtc2Q8CGW9 370 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Zg16Q8K0C5 167 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tmem70Q921N7 253 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tmem107Q9CPV0 140 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Tnfrsf13bQ9ET35 249 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 CnmdQ9Z1F6 334 aa12.91□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm14412A2ARR7 526 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm37240E9QAY5 252 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Grcc10O35127 126 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ighv3-6P18531 116 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Rtl4Q3URY0 304 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 BsxQ810B3 232 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Wisp2Q9Z0G4 251 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gm28778A0A087WSK7 233 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Zfp386Q1WWJ5 626 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Gls2Q571F8 602 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Morn2Q6UL01 79 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Vmn1r26Q8R2D7 339 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ighv7-2A0A0A6YX91 119 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 BC053393A0A0B4J1F6 192 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Olfr913E9Q716 312 aa12.9□□□□□ -0.34
Trim39-203ENSMUST00000113706 Ms4a13Q5FWC3 203 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms