RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm15114B1B0X6 433 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm21882J3QN86 361 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm10881P01642 115 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Iglc3P01845 104 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ccl11P48298 97 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gcm1P70348 436 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Zfp386Q1WWJ5 626 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Znf691Q3TDE8 283 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Il31Q6EAL8 163 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rbfox2Q8BP71 449 aaKnown RBP8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ss18l1Q8BW22 402 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Fbln5Q9WVH9 448 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Zfp109A0A0U1RPC5 652 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Vmn1r119E9Q4H3 307 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cd5P13379 494 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Slc17a2Q5SZA1 478 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ypel2Q65Z95 119 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rasl11bQ922H7 247 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cldn23Q9D7D7 296 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ypel1Q9ESC7 118 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rnd2Q9QYM5 227 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Dock4P59764 1978 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 4931422A03RikA2BHN9 113 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Frrs1lB1AXV0 293 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 MyadmO35682 320 aaKnown RBP8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rpl13aP19253 203 aaKnown RBP8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 CebpbP28033 296 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Prrx2Q06348 247 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Tnfsf18Q7TS55 173 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Psg22Q810J1 475 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Spsb4Q8R5B6 273 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Mbnl1Q9JKP5 341 aaKnown RBP8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 6430628N08RikA0A0U1RQ45 177 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm5093E9PZB3 174 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rpl30P62889 115 aaKnown RBP8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Trdv4Q5R1A3 115 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 PaxxQ8K0Y7 205 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1295Q8VF48 312 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ube2tQ9CQ37 204 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ndufaf3Q9JKL4 185 aa8.69□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 1810011H11RikE9PVZ2 95 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Smr2O09133 150 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 NracQ8BNX7 165 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Uqcc3Q8K2T4 89 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr123Q8VFQ1 309 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Fgfrl1Q91V87 529 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Trav6-1A0A075B5Z8 112 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ighv6-4A0A0A6YX19 119 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm37797A0A1D5RLC8 261 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr749E9Q438 313 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Sfrp2P97299 295 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm9733Q1AN91 178 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Mrpl33Q9CQP0 65 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Vmn1r54Q9EPB8 315 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Osr1Q9WVG7 266 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Fabp4P04117 132 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Znrf1Q91V17 227 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr954Q9EQB6 314 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr715bE9Q725 315 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Mfge8P21956 463 aaKnown RBP8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cd52Q64389 74 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1434Q7TQR9 312 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 H2-M10.4Q85ZW8 331 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm10190Q8BSD7 107 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr959Q9EQ86 311 aa8.68□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rps20P60867 119 aaKnown RBP8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 V1rd19Q3KNP5 305 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr139Q60891 315 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 D1Ertd622eQ8VEB3 207 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ufc1Q9CR09 167 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ccl28Q9JIL2 130 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Tmem238lA0A1B0GS74 79 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm765B2RVL9 189 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm9Q3UKW5 162 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 RprmlQ3URD2 117 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Rtn4rl2Q7M6Z0 420 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gtf2h5Q8K2X8 71 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Mbnl3Q8R003 342 aaKnown RBP8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Pcgf1Q8R023 259 aaKnown RBP8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Defb6Q91VD6 63 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gatad1Q920S3 266 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Prss28Q924N9 274 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cela3bQ9CQ52 269 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Vps25Q9CQ80 176 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cd200r1Q9ES57 326 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Klk1b27Q9JM71 263 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm10665K7N6B7 321 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Supt4h1aP63271 117 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Acsm5Q8BGA8 578 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr482Q8VG03 323 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Vwa8Q8CC88 1905 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ralgapa1Q6GYP7 2035 aa8.67□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Igkv13-85A0A075B666 115 aa8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Zfp11P10751 647 aa8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cd3eP22646 189 aa8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Csrp1P97315 193 aaKnown RBP8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Fam3dP97805 223 aa8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr25Q7TRD6 313 aa8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Fam206aQ80ZQ9 193 aaKnown RBP8.66□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Arl6ip6Q8BH07 226 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms