RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Chchd1Q9CQA6 118 aa11.16□□□□□ -0.62
Nup88-201ENSMUST00000035283 MNCb-2875Q9DCB3 74 aa11.16□□□□□ -0.62
Nup88-201ENSMUST00000035283 Egr4Q9WUF2 478 aa11.16□□□□□ -0.62
Nup88-201ENSMUST00000035283 Map1bP14873 2464 aaKnown RBP11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Olfr1118A0A0J9YUE7 307 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 AU041133A0A0J9YVH3 498 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Mettl23A2AA28 253 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Tm4sf19E9Q9H8 206 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Edn1P22387 202 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Asphd1Q2TA57 360 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Gpr6Q6YNI2 363 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Immp2lQ8BPT6 175 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Plppr2Q8VCY8 343 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Zcchc10Q9CX48 178 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Gp2Q9D733 531 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Olfr894Q9EQB2 313 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Znf22Q9ERU3 237 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Pard6aQ9Z101 346 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Frrs1lB1AXV0 293 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 P01796 113 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 P01797 113 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 P01799 113 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 S100a10P08207 97 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Jmjd7P0C872 316 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Cd79bP15530 228 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Spam1P48794 512 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Ypel3P61237 119 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Rpl31P62900 125 aaKnown RBP11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 ClcP97400 68 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Henmt1Q8CAE2 395 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Ms4a3Q920C4 213 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 Mmp17Q9R0S3 578 aa11.15□□□□□ -0.62
Nup88-201ENSMUST00000035283 TprF6ZDS4 2431 aaKnown RBP11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ighv5-4A0A075B5P9 117 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm21244J3QK38 227 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 A630076J17RikJ3QQ32 107 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 P01788 123 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 CapgP24452 352 aaKnown RBP11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Sox15P43267 231 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 PaxxQ8K0Y7 205 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Nicn1Q9CQM0 213 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Btbd17Q9DB72 478 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cml1Q9JIZ0 222 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm27027S4R1M6 97 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Slc35b1P97858 322 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cyb561Q60720 250 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Prss3Q792Z0 246 aaKnown RBP11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr58Q7TRF6 309 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr399Q7TRX3 311 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 C130073F10RikQ8C4L8 201 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cotl1Q9CQI6 142 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Urm1Q9D2P4 101 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Nudt3Q9JI46 168 aa11.14□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cacna1iE9Q7P2 2199 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Kiaa1549Q68FD9 1940 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr609E9Q4X7 319 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Mef2bO55087 349 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ssty1P13675 232 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Pax8Q00288 457 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Arrdc5Q497K5 325 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Fbxw26Q8BI58 466 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Bricd5Q8BV89 174 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Higd1bQ99JY6 98 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Arl13aQ9D416 372 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 RelnQ60841 3461 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1245A0A1L1SQJ6 307 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 A0A286YDM5 308 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm20825J3QM67 227 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Oprk1P33534 380 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Atp5g2P56383 146 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ube2nP61089 152 aaKnown RBP11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 SelenotP62342 195 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ssty2Q149W4 227 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Zfp936Q3ULA8 456 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm21394Q497R7 227 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm20854Q62461 227 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1382Q7TQT3 311 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Olfr1356Q7TQU8 320 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Hapln4Q80WM4 400 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Slc25a48Q8BW66 306 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm17324Q8C6J8 137 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Nrn1Q8CFV4 142 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 HpxQ91X72 460 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Flg2Q2VIS4 2362 aa11.13□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ighv1-26A0A075B5V0 117 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ighv7-2A0A0A6YX91 119 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm14325A2AW67 498 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm44501A8R0T9 150 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 A930017K11RikE0CXQ2 571 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Ccdc188F6WEU2 249 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cldn34c3J3QJW5 233 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cldn34c2J3QNM1 233 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Tnfsf12O54907 249 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Mtco2P00405 227 aaKnown RBP11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 P01915 264 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Defa-rs1P17533 116 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Acrv1P50289 261 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Cited1P97769 203 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Pate4Q09098 99 aa11.12□□□□□ -0.63
Nup88-201ENSMUST00000035283 Gm10384Q3UQ87 92 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms