RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 B2mP01887 119 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 CxadrP97792 365 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Jsrp1Q3MI48 332 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Rnf126Q91YL2 313 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Scrt1Q99M85 348 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Fxyd4Q9D2W0 88 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Gm9376G3UW68 176 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Ca11O70354 328 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Slc25a5P51881 298 aaKnown RBP12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Zfp386Q1WWJ5 626 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 KncnQ307W7 124 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Ndufaf3Q9JKL4 185 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Cst10Q9JM84 148 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 H2-M5A7VMS3 348 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 P01783 136 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Dmrtc1c1Q9D410 238 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Lmntd1Q9D4C1 413 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Ctnnbip1Q9JJN6 81 aa12.29□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Rpl27aP14115 148 aaKnown RBP12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Twist1P26687 206 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Neurog3P70661 214 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Smim9Q3V0X1 137 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Rtl6Q505G4 243 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 CenpfE9Q3P4 2997 aaKnown RBP12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Gm28171A0A087WQ19 227 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 AU041133A0A0J9YVH3 498 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Sdr39u1Q5M8N4 308 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 NracQ8BNX7 165 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Olfr266Q8VFC3 316 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Olfr1342Q8VFY3 315 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Lurap1Q9D6I9 239 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Hspb9Q9DAM3 168 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Olfr926Q9EQ98 308 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Dnajb12Q9QYI4 376 aaKnown RBP12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Gata2O09100 480 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Cd59aO55186 123 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 P18530 117 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Q3UZV7 1028 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Lrtm1Q8BXQ3 356 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Gar1Q9CY66 231 aaKnown RBP12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Ighv8-9A0A0G2JET1 119 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Olfr1098A2AVB0 315 aa12.28□□□□□ -0.44
Rtf1-201ENSMUST00000028767 MsmpB1AWI6 139 aa12.27□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Hspb7P35385 169 aa12.27□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Srsf7Q8BL97 267 aaKnown RBP12.27□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Vmn1r46Q9EQ45 309 aa12.27□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Nudt3Q9JI46 168 aa12.27□□□□□ -0.44
Rtf1-201ENSMUST00000028767 Igkv5-37A0A140T8N4 115 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 P06323 132 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Ms4a13Q5FWC3 203 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Tmem167bQ80X45 74 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 H2-M10.4Q85ZW8 331 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 IqcjQ8BPW0 110 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Rps2-ps6A0A140T8L5 221 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Gm21244J3QK38 227 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 A630076J17RikJ3QQ32 107 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Olfr191L7N1Z8 309 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Spink11Q09TK7 88 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Tmem204Q7TQI0 226 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Nit1Q8VDK1 323 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 4930412O13RikQ9D5M9 106 aa12.27□□□□□ -0.45
Rtf1-201ENSMUST00000028767 TracA0A075B662 137 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Rnf212bD3Z423 297 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Eid2bE9Q2Y0 151 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 P18528 98 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Rpl8P62918 257 aaKnown RBP12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Rnf182Q8C432 247 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Cd300eQ8K249 196 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Pitpnc1Q8K4R4 332 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Olfr223Q8VF69 319 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Olfr482Q8VG03 323 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Tppp3Q9CRB6 176 aaKnown RBP12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Med12lQ8BQM9 2157 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Ighv7-2A0A0A6YX91 119 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Gnb4P29387 340 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 AgaQ64191 346 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Cd52Q64389 74 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Gm44596A0A0N4SVA0 210 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Trav12d-1A0N8R0 115 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Tcf21O35437 179 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Bcl6bO88282 474 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 RanP62827 216 aaKnown RBP12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Aqp11Q8BHH1 271 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Zfp930A0A1D5RM15 441 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Gm6993A0A1W2P738 69 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Cldn34c4A2ANA3 212 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Gm10036E9PYL9 178 aaKnown RBP12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Rom1P32958 351 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Olfr1026Q7TR90 307 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Vmn1r222Q8R269 308 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Pbp2Q8VIN1 187 aa12.26□□□□□ -0.45
Rtf1-201ENSMUST00000028767 AgrnA2ASQ1 1950 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Ccdc71lE9Q4T4 218 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Zfp455Q7M6X9 461 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Dirc2Q8BFQ6 478 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Shisal2bQ9D1Y9 158 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Cd209gD3Z5D4 194 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Iqcf6G3UWF2 157 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Hoxa1P09022 331 aa12.25□□□□□ -0.45
Rtf1-201ENSMUST00000028767 Hoxb2P0C1T1 354 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 111.6 ms