RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Id3P41133 119 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gnb1P62874 340 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Otx1P80205 355 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tff3Q62395 81 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Derl1Q99J56 251 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 H2al3Q9D4U4 128 aa13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ahctf1Q8CJF7 2243 aaKnown RBP13.53□□□□□ -0.24
Trim28-201ENSMUST00000005705 Trav23A0A0G2JG17 115 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Mpig6bD7PDD4 242 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Pwwp2bE9Q9M8 600 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gm4791J3QQ14 102 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Gata2O09100 480 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 BsxQ810B3 232 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ankrd33Q8BXP5 385 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr736Q8VFT6 312 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr124Q8VGW6 315 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ppp1r14aQ91VC7 147 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 NgbQ9ER97 151 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Pard6aQ9Z101 346 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Ly6g6dQ9Z1Q3 135 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Col27a1Q5QNQ9 1845 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Igkv4-50A0A0B4J1J0 117 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Klri1B2KG20 248 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 AponG3X9D6 251 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Vmn1r78K7N608 313 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tnfrsf17O88472 185 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Lrtm2Q8BGX3 370 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Olfr355Q8VFP6 310 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Tmem147Q9CQG6 224 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Coa3Q9D2R6 108 aa13.52□□□□□ -0.24
Trim28-201ENSMUST00000005705 Vmn1r232A2RTT5 351 aa13.52□□□□□ -0.25
Trim28-201ENSMUST00000005705 Cd81P35762 236 aa13.52□□□□□ -0.25
Trim28-201ENSMUST00000005705 Zfp386Q1WWJ5 626 aa13.52□□□□□ -0.25
Trim28-201ENSMUST00000005705 FibinQ9CQS3 217 aa13.52□□□□□ -0.25
Trim28-201ENSMUST00000005705 MNCb-2875Q9DCB3 74 aa13.52□□□□□ -0.25
Trim28-201ENSMUST00000005705 Zfp931A2AHM2 298 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Smim7Q5RKS2 75 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm10334Q792Y8 246 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Psg16Q8K0U8 395 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Cdpf1Q8R3A2 119 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 TslpQ9JIE6 140 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ccl28Q9JIL2 130 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ncoa6Q9JL19 2067 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Igkv13-84A0A140T8N3 115 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm3045A0A1D5RMA1 209 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 P01787 123 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 P18529 117 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Timm8bP62077 83 aaKnown RBP13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1356Q7TQU8 320 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Nus1Q99LJ8 297 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 AmtnQ9D3J8 213 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Awat1A2ADU9 328 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Pcp4P63054 62 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1362Q5SZZ8 308 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Tnfsf15Q5UBV8 252 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1434Q7TQR9 312 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr874Q7TRE6 310 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Psg22Q810J1 475 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 PirtQ8BFY0 135 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 1700001C19RikQ8K168 210 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Stac2Q8R1B0 408 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Plppr2Q8VCY8 343 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr983Q8VG90 315 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Q9DAA3 117 aa13.51□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1245A0A1L1SQJ6 307 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Igkv4-51A0N8I8 119 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 P06323 132 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gpank1Q61858 372 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Cdkn2aQ64364 169 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Tmprss3Q8K1T0 453 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Cds2Q99L43 444 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Mrps11Q9DCA2 191 aaKnown RBP13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 AplnrQ9WV08 377 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 1700025C18RikA2A580 89 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm6904E9PVF1 202 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 TymsP07607 307 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Pax8Q00288 457 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Sp9Q64HY3 484 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Aadacl4Q8BM81 407 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 AdtrpQ8C138 230 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1342Q8VFY3 315 aa13.5□□□□□ -0.25
Trim28-201ENSMUST00000005705 Igkv14-100A0A0G2JG36 117 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr284A0A0U1RP76 321 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm14325A2AW67 498 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Esp6A8R0U0 136 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm12169F2Z474 250 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 GzmfP08883 248 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 KncnQ307W7 124 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Cd33Q63994 403 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Fbxw26Q8BI58 466 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 HpxQ91X72 460 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Mixl1Q9WUI0 231 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ighv5-2A0A0A6YVX8 117 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 SncaO55042 140 aaKnown RBP13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 CapgP24452 352 aaKnown RBP13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 HykkQ5U5V2 376 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Fxyd3Q61835 88 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Smim12Q78RX3 92 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr875Q7TRE5 310 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Vwc2Q8C8N3 324 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms