RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 J3QLI3 93 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 M0QZ24 198 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 NDUFA4O00483 81 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 BRI3O95415 125 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 DDTP30046 118 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 LOXL1Q08397 574 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-226ENST00000641756 GLMPQ8WWB7 406 aa13.68□□□□□ -0.22
PHGDH-226ENST00000641756 PTPN13Q12923 2485 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 LOC102724200A0A096LPH7 203 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-226ENST00000641756 LYZL1Q6UWQ5 148 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 NIT1Q86X76 327 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 NDFIP1Q9BT67 221 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 MUC21A0A0G2JKD1 596 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 MUC21A0A140T8X8 626 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 IGHV4-31P0DP07 118 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 CFHR3Q02985 330 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 DEFB113Q30KQ7 82 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 MUC21Q5SSG8 566 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 IL17RELQ6ZVW7 336 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 URB1-AS1Q96HZ7 61 aa13.67□□□□□ -0.22
PHGDH-226ENST00000641756 HSBP1O75506 76 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 Q5PR19 223 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 Q6AWC8 147 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 C16orf92Q96LL3 132 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 CR1P17927 2039 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 BMI1P35226 326 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 BORCS7Q96B45 105 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
PHGDH-226ENST00000641756 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
PHGDH-226ENST00000641756 RBAKDNA6NC62 111 aa13.65□□□□□ -0.22
PHGDH-226ENST00000641756 DEFA6Q01524 100 aa13.65□□□□□ -0.22
PHGDH-226ENST00000641756 C10orf99Q6UWK7 81 aa13.65□□□□□ -0.22
PHGDH-226ENST00000641756 TMEM213A2RRL7 107 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 TDRG1Q3Y452 100 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 NPFFR1Q9GZQ6 430 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 SELENOKQ9Y6D0 94 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 A0A0G2JLM5 398 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 M0R2Z0 102 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 ORM1P02763 201 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 BEX4Q9NWD9 120 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-226ENST00000641756 ABCA12Q86UK0 2595 aa13.64□□□□□ -0.23
PHGDH-226ENST00000641756 PMCHL1Q16048 86 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 Q8N976 141 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 C20orf173Q96LM9 149 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 FABP5P3A8MUU1 101 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 ZNF575Q86XF7 245 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 GATD1Q8NB37 220 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
PHGDH-226ENST00000641756 A0A1B0GW15 77 aa13.62□□□□□ -0.23
PHGDH-226ENST00000641756 C3orf79P0CE67 100 aa13.62□□□□□ -0.23
PHGDH-226ENST00000641756 FAM209BQ5JX69 171 aa13.62□□□□□ -0.23
PHGDH-226ENST00000641756 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
PHGDH-226ENST00000641756 FER1L6-AS1Q8NA97 138 aa13.62□□□□□ -0.23
PHGDH-226ENST00000641756 MRPL53Q96EL3 112 aaKnown RBP13.62□□□□□ -0.23
PHGDH-226ENST00000641756 Q96MF0 132 aa13.62□□□□□ -0.23
PHGDH-226ENST00000641756 ZNF138P52744 262 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 RPS20P60866 119 aaKnown RBP13.61□□□□□ -0.23
PHGDH-226ENST00000641756 TEX43Q6ZNM6 134 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 IGKV3-7A0A075B6H7 116 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 FSHBP01225 129 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 EDN2P20800 178 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 RPL11P62913 178 aaKnown RBP13.61□□□□□ -0.23
PHGDH-226ENST00000641756 C9orf139Q6ZV77 190 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 ZNF738Q8NE65 137 aa13.61□□□□□ -0.23
PHGDH-226ENST00000641756 NAV2Q8IVL1 2488 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 CSN3P07498 182 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 PSMB8P28062 276 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
PHGDH-226ENST00000641756 FAM181BA6NEQ2 426 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 IGLC6P0CF74 106 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 ZNF493Q6ZR52 646 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 VPREB3Q9UKI3 123 aa13.6□□□□□ -0.23
PHGDH-226ENST00000641756 KIR2DL5BA0A0G2JN68 375 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 KIR2DL5BA0A0G2JPC4 375 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 DEFB1P60022 68 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 C9orf47Q6ZRZ4 202 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 REC114Q7Z4M0 266 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 AMN1Q8IY45 258 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 KIR2DL5AQ8N109 375 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 LRRC75A-AS1Q8N1F1 130 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 PSMG3-AS1Q96PY0 264 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 RHPN1-AS1Q9BWJ2 59 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 ZNF580Q9UK33 172 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 PAM16Q9Y3D7 125 aa13.59□□□□□ -0.23
PHGDH-226ENST00000641756 IGHV7-4-1A0A0J9YVY3 117 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 CTRLP40313 264 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 SRSF2Q01130 221 aaKnown RBP13.58□□□□□ -0.23
PHGDH-226ENST00000641756 TWIST1Q15672 202 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 EBLN2Q6P2I7 272 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 Q6YL49 198 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 Q6ZQT7 251 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 CLEC5AQ9NY25 188 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 C11orf21Q9P2W6 132 aa13.58□□□□□ -0.23
PHGDH-226ENST00000641756 SOCS3O14543 225 aa13.58□□□□□ -0.24
PHGDH-226ENST00000641756 LINC00614P0C842 121 aa13.58□□□□□ -0.24
PHGDH-226ENST00000641756 LINC01559Q495D7 138 aa13.58□□□□□ -0.24
PHGDH-226ENST00000641756 CHCHD1Q96BP2 118 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms