RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 NUP98P52948 1817 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 TMEM30CPA0ZSE6 113 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 BBIP1A8MTZ0 92 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 TMEM14DPA8MWL7 114 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 ACYP2P14621 99 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 DEFA5Q01523 94 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 CD302Q8IX05 232 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 C20orf196Q8IYI0 205 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 TCTEX1D1Q8N7M0 179 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 DMAC1Q96GE9 116 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 BATF3Q9NR55 127 aa-3.34□□□□□ -2.94
LMBR1-222ENST00000638959 EEF1E1-BLOC1S5C9J1V9 151 aa-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 LYRM1O43325 122 aa-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 LYPD5Q6UWN5 251 aa-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 ALKAL1Q6UXT8 129 aa-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 ST13P4Q8IZP2 240 aaPredicted RBP-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 CCDC124Q96CT7 223 aaKnown RBP-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 MAP1LC3AQ9H492 121 aa-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 PLXNA2O75051 1894 aa-3.35□□□□□ -2.95
LMBR1-222ENST00000638959 KIF27Q86VH2 1401 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 BIRC5O15392 142 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 IDO1P14902 403 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 RPL12P30050 165 aaKnown RBP-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 KDELR2P33947 212 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 NAA20P61599 178 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 UNQ5815/PRO19632Q6UWF5 114 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 IZUMO2Q6UXV1 221 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 C12orf45Q8N5I9 185 aaPredicted RBP-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 OR51D1Q8NGF3 324 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 SMIM19Q96E16 107 aa-3.36□□□□□ -2.95
LMBR1-222ENST00000638959 NINQ8N4C6 2090 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 TRAV26-2A0A0B4J265 109 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 TRBV10-3A0A0K0K1G6 114 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 ZNF670-ZNF695F2Z2N8 137 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 IGKCP01834 107 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 SMIM17P0DL12 118 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 KLRD1Q13241 179 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 BCL2L15Q5TBC7 163 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 SLC22A13Q9Y226 551 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 TEX15Q9BXT5 2789 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 KIAA1549LQ6ZVL6 1849 aa-3.37□□□□□ -2.95
LMBR1-222ENST00000638959 TEX49A0A1B0GTD5 131 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 NKAIN1Q4KMZ8 207 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 CLVS2Q5SYC1 327 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 LRRC20Q8TCA0 184 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 KCTD7Q96MP8 289 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 ATG5Q9H1Y0 275 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 LYSTQ99698 3801 aa-3.38□□□□□ -2.95
LMBR1-222ENST00000638959 TRBV7-1A0A0A6YYK4 115 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 RBAKDNA6NC62 111 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 G3V318 75 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 HPGDSO60760 199 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 COX6B1P14854 86 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 MYL12AP19105 171 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 HIST1H1TP22492 207 aaPredicted RBP-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 SDC4P31431 198 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 UBE2BP63146 152 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 AKIRIN2Q53H80 203 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 LYRM7Q5U5X0 104 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 TMEM229BQ8NBD8 167 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 EFCAB11Q9BUY7 163 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 TP53AIP1Q9HCN2 124 aa-3.39□□□□□ -2.95
LMBR1-222ENST00000638959 C3orf85A0A1B0GTC6 90 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 PIN1P1O15428 100 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 BCE1O60756 84 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 IVLP07476 585 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 IL7P13232 177 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 CCL2P13500 99 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 OR2F1Q13607 317 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 SFXN4Q6P4A7 337 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 TMEM86BQ8N661 226 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 ARL6IP6Q8N6S5 226 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 PPP1R2P1Q96PQ5 205 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 LINC00472Q9H8W2 130 aa-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 CACYBPQ9HB71 228 aaKnown RBP-3.4□□□□□ -2.95
LMBR1-222ENST00000638959 WDR7Q9Y4E6 1490 aa-3.41□□□□□ -2.95
LMBR1-222ENST00000638959 LYPLA2O95372 231 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 OR5G3P0C626 314 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 RD3LP0DJH9 198 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 CAPZBP47756 277 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 DYNLT3P51808 116 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 RRN3P1Q2M238 152 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 SDHAF4Q5VUM1 108 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 Q6Q795 121 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 TVP23BQ9NYZ1 205 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 PKIGQ9Y2B9 76 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 SIPA1L3O60292 1781 aaPredicted RBP-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 CELSR3Q9NYQ7 3312 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 GOLGA3Q08378 1498 aa-3.41□□□□□ -2.96
LMBR1-222ENST00000638959 ARL5CA6NH57 179 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 LRRN3E7EW58 273 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 KPNA3O00505 521 aaPredicted RBP-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 NPFFO15130 113 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 BRI3O95415 125 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 IMPG1Q17R60 797 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 TEX37Q96LM6 180 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 CIB3Q96Q77 187 aaPredicted RBP-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 ROBO3Q96MS0 1386 aa-3.42□□□□□ -2.96
LMBR1-222ENST00000638959 CASZ1Q86V15 1759 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 TRBV6-1A0A0K0K1D8 114 aa-3.43□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms