RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 ATP6V0E1O15342 81 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 CD5LO43866 347 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 C2orf91Q6ZV80 131 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 WFDC3Q8IUB2 231 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 RNF182Q8N6D2 247 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 ZNF502Q8TBZ5 544 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 RNASE8Q8TDE3 154 aaKnown RBP8.3□□□□□ -1.08
PSPC1-207ENST00000635251 SIRPDQ9H106 197 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
PSPC1-207ENST00000635251 IGHV3OR16-13A0A075B7E8 117 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 IGHV3-74A0A0B4J1X5 117 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 PRAC2D3DTV9 90 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 NDUFS7O75251 213 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 RAB9AP51151 201 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 CLEC19AQ6UXS0 136 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 MUC6Q6W4X9 2439 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 PPIFP30405 207 aaKnown RBP8.29□□□□□ -1.08
PSPC1-207ENST00000635251 SRSF2Q01130 221 aaKnown RBP8.29□□□□□ -1.08
PSPC1-207ENST00000635251 FOXE3Q13461 319 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 PRSS57Q6UWY2 283 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 GVINP1Q7Z2Y8 2422 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 OR1N2Q8NGR9 330 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 DPF1Q92782 380 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 RAXQ9Y2V3 346 aa8.29□□□□□ -1.08
PSPC1-207ENST00000635251 DCHS1Q96JQ0 3298 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 BUB3O43684 328 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 UQCRFS1P47985 274 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 IL17RELQ6ZVW7 336 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 DTX2Q86UW9 622 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 C18orf15Q96N68 181 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 SLC50A1Q9BRV3 221 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 ZFAND3Q9H8U3 227 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 K7EP13 123 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 PPBPP02775 128 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 UBE2E1P51965 193 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 UCNP55089 124 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 RNF185Q96GF1 192 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 UBTD1Q9HAC8 227 aa8.28□□□□□ -1.08
PSPC1-207ENST00000635251 PEF1Q9UBV8 284 aaKnown RBP8.28□□□□□ -1.08
PSPC1-207ENST00000635251 C7orf71A4D174 169 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 G3V318 75 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 ZNF207O43670 478 aaKnown RBP8.27□□□□□ -1.09
PSPC1-207ENST00000635251 FGF6P10767 208 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 EVI2AP22794 236 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 SAA4P35542 130 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 NMUP48645 174 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 PAX8Q06710 450 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 EEF1AKMT3Q96AZ1 226 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 SMAD7O15105 426 aaKnown RBP8.27□□□□□ -1.09
PSPC1-207ENST00000635251 TNFRSF6BO95407 300 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 LEPP41159 167 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 SEC11AP67812 179 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 CCDC140Q96MF4 163 aa8.27□□□□□ -1.09
PSPC1-207ENST00000635251 TPRP12270 2363 aaKnown RBP8.26□□□□□ -1.09
PSPC1-207ENST00000635251 A1L4Q6 167 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 GAS8-AS1O95177 125 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 TMEM78Q5T7P6 136 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 AP1S3Q96PC3 154 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 METTL26Q96S19 204 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 NXT2Q9NPJ8 142 aaKnown RBP8.26□□□□□ -1.09
PSPC1-207ENST00000635251 A6NDN8 102 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 LINC01548A6NM66 108 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 AGPAT4-IT1Q9H0P7 198 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
PSPC1-207ENST00000635251 TRAV8-6A0A0B4J262 113 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 A0A1W2PPR1 153 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 CLPSL1A2RUU4 121 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 PRSS1P07477 247 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 FCER1GP30273 86 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 RNF151Q2KHN1 245 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 OR9G4Q8NGQ1 327 aa8.25□□□□□ -1.09
PSPC1-207ENST00000635251 TRBV7-1A0A0A6YYK4 115 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 IGKV3D-20A0A0C4DH25 116 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 GATA1P15976 413 aaPredicted RBP8.24□□□□□ -1.09
PSPC1-207ENST00000635251 RBX1P62877 108 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 AJUBAQ96IF1 538 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 NPFFO15130 113 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 EFNA4P52798 201 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 ATP5G2Q06055 141 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 HSD52Q0P140 79 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 BPESC1Q9GZL8 116 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 UFC1Q9Y3C8 167 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 SPTBN2O15020 2390 aa8.24□□□□□ -1.09
PSPC1-207ENST00000635251 ANKHD1Q8IWZ3 2542 aaKnown RBP8.24□□□□□ -1.09
PSPC1-207ENST00000635251 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
PSPC1-207ENST00000635251 CENPVL3A0A0U1RRI6 287 aa8.23□□□□□ -1.09
PSPC1-207ENST00000635251 NDUFS8O00217 210 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms