RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 P0DMU3 169 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 FAM231AP0DMU4 169 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 FAM231CP0DMU5 169 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 CSN1S1P47710 185 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 EIF5AP63241 154 aaKnown RBP11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 LYPD1Q8N2G4 141 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 TMEM208Q9BTX3 173 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 NDUFAF3Q9BU61 184 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 Q9H3A6 140 aa11.14□□□□□ -0.63
SNRNP48-203ENST00000634363 NPIPB6E9PJ23 425 aa11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 C1QBP02746 253 aa11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 MED14OSP0DP75 135 aa11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 TSPOP30536 169 aa11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 FAM74A1Q5RGS3 127 aa11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 ZNF705AQ6ZN79 300 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 TMUB2Q71RG4 321 aa11.13□□□□□ -0.63
SNRNP48-203ENST00000634363 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 CXorf1O96002 111 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 CDKN1BP46527 198 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 EMP1P54849 157 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 IQCF2Q8IXL9 164 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 BAP18Q8IXM2 172 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 HYLS1Q96M11 299 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 TMEM167BQ9NRX6 74 aa11.12□□□□□ -0.63
SNRNP48-203ENST00000634363 TRAV12-2A0A075B6T6 113 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 IGKV2-40A0A087WW87 121 aaPredicted RBP11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 RTL8CO15255 209 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 IGKV2D-40P01614 121 aaPredicted RBP11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 TPT1P13693 172 aaKnown RBP11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 GCHFRP30047 84 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 LEPP41159 167 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 CMTM2Q8TAZ6 248 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 ODF3Q96PU9 254 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 NEU1Q99519 415 aa11.11□□□□□ -0.63
SNRNP48-203ENST00000634363 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 CRXO43186 299 aaPredicted RBP11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 HBE1P02100 147 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 SEC11BP0C7V7 166 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 UBE2DNLQ8IWF7 75 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 RXFP4Q8TDU9 374 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 MUC4Q99102 2169 aa11.1□□□□□ -0.63
SNRNP48-203ENST00000634363 PGPA6NDG6 321 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 SPART-AS1P0CW21 52 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 ERCC8Q13216 396 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 ZNF726P1Q15940 193 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 SSX7Q7RTT5 188 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 RPH3ALQ9UNE2 315 aa11.09□□□□□ -0.63
SNRNP48-203ENST00000634363 A0A1B0GVG6 124 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 TMEM189A5PLL7 270 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 MAP1LC3B2A6NCE7 125 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 UMAD1C9J7I0 102 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 J3KRW8 73 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 RRN3P1Q2M238 152 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 LGALSLQ3ZCW2 172 aaPredicted RBP11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 ZFP69Q49AA0 526 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 C9orf47Q6ZRZ4 202 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 TMEM256Q8N2U0 113 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 MAP1LC3BQ9GZQ8 125 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 AGPAT4-IT1Q9H0P7 198 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 HERC2O95714 4834 aa11.08□□□□□ -0.64
SNRNP48-203ENST00000634363 RBAKDNA6NC62 111 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 DIRC3C9JPN6 131 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 SLC25A5P05141 298 aaKnown RBP11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 GFI1BQ5VTD9 330 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 SUN5Q8TC36 379 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 LINC01587Q99440 93 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 VGLL1Q99990 258 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 PLA2G2EQ9NZK7 142 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
SNRNP48-203ENST00000634363 LOC102723971A0A1B0GUV8 181 aa11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 HTN3P15516 51 aa11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 ZNF138P52744 262 aa11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 ARL6IP6Q8N6S5 226 aa11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 FAM213BQ8TBF2 198 aa11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 TMED6Q8WW62 240 aa11.06□□□□□ -0.64
SNRNP48-203ENST00000634363 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 H7BYZ3 331 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 CD300CQ08708 224 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 KIR3DS1Q14943 382 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 DPPA3Q6W0C5 159 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 Q8TAT8 98 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 ZNF492Q9P255 531 aa11.05□□□□□ -0.64
SNRNP48-203ENST00000634363 TRAV12-3A0A0B4J271 114 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms