RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 LOXL1Q08397 574 aaPredicted RBP13.77□□□□□ -0.21
PCF11-207ENST00000624931 LGALS9BQ3B8N2 356 aa13.77□□□□□ -0.21
PCF11-207ENST00000624931 LGALS9CQ6DKI2 356 aa13.77□□□□□ -0.21
PCF11-207ENST00000624931 WFDC11Q8NEX6 87 aa13.77□□□□□ -0.21
PCF11-207ENST00000624931 NPFFR1Q9GZQ6 430 aa13.77□□□□□ -0.21
PCF11-207ENST00000624931 NPFFO15130 113 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 AVPP01185 164 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 IGHV4-38-2P0DP08 117 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 C21orf62-AS1Q17RA5 79 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 BRD3OSQ6XYD6 125 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 EXOC3-AS1Q8N2X6 119 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 LINC01356Q8N9X3 169 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 ZC2HC1AQ96GY0 325 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 CST9LQ9H4G1 147 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCF11-207ENST00000624931 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
PCF11-207ENST00000624931 TRAV8-1A0A0A6YYK1 113 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 IGHV4-31P0DP07 118 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 SIGLEC15Q6ZMC9 328 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 COX8CQ7Z4L0 72 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
PCF11-207ENST00000624931 PDZD2O15018 2839 aa13.75□□□□□ -0.21
PCF11-207ENST00000624931 CSMD1Q96PZ7 3565 aa13.75□□□□□ -0.21
PCF11-207ENST00000624931 A6NDN8 102 aa13.75□□□□□ -0.21
PCF11-207ENST00000624931 H3BTX0 84 aa13.75□□□□□ -0.21
PCF11-207ENST00000624931 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
PCF11-207ENST00000624931 OR9G4Q8NGQ1 327 aa13.75□□□□□ -0.21
PCF11-207ENST00000624931 K7ERU9 68 aa13.74□□□□□ -0.21
PCF11-207ENST00000624931 IGKV1-17P01599 117 aa13.74□□□□□ -0.21
PCF11-207ENST00000624931 CSN3P07498 182 aa13.74□□□□□ -0.21
PCF11-207ENST00000624931 AMMECR1LQ6DCA0 310 aa13.74□□□□□ -0.21
PCF11-207ENST00000624931 AAMDCQ9H7C9 122 aa13.74□□□□□ -0.21
PCF11-207ENST00000624931 IGHV3-21A0A0B4J1V1 117 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 IGHV1-69DA0A0B4J2H0 117 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 WI2-2373I1.2A0A1W2PRP0 233 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 OR2T8A6NH00 312 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 CBY3A6NI87 242 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 ZNF785A8K8V0 405 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 TGFAP01135 160 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 IGHV1-69P01742 117 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 S100A7P31151 101 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 ZNF138P52744 262 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 PSG9Q00887 426 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 OCIAD2Q56VL3 154 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 GTF2H5Q6ZYL4 71 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 ZNF48Q96MX3 618 aaPredicted RBP13.73□□□□□ -0.21
PCF11-207ENST00000624931 H3BRM9 83 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 LINC01559Q495D7 138 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 KLF17Q5JT82 389 aaPredicted RBP13.73□□□□□ -0.21
PCF11-207ENST00000624931 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 PRSS57Q6UWY2 283 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 C2orf91Q6ZV80 131 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 ORMDL3Q8N138 153 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 ZNF414Q96IQ9 312 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 FBXL15Q9H469 300 aa13.73□□□□□ -0.21
PCF11-207ENST00000624931 ITPR2Q14571 2701 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 CCDC168Q8NDH2 2452 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 A0A087X0K7 114 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 TMEM189A5PLL7 270 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 MRPS12O15235 138 aaKnown RBP13.72□□□□□ -0.21
PCF11-207ENST00000624931 SRSF2Q01130 221 aaKnown RBP13.72□□□□□ -0.21
PCF11-207ENST00000624931 HES1Q14469 280 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 OR4X2Q8NGF9 303 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 RNF125Q96EQ8 232 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 AP1S3Q96PC3 154 aa13.72□□□□□ -0.21
PCF11-207ENST00000624931 C7orf71A4D174 169 aa13.71□□□□□ -0.21
PCF11-207ENST00000624931 K7EIM0 57 aa13.71□□□□□ -0.21
PCF11-207ENST00000624931 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
PCF11-207ENST00000624931 ZNF491Q8N8L2 437 aa13.71□□□□□ -0.21
PCF11-207ENST00000624931 PRELID3AQ96N28 172 aa13.71□□□□□ -0.21
PCF11-207ENST00000624931 ITPR3Q14573 2671 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 OOSP1A8MZH6 123 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 SMAD7O15105 426 aaKnown RBP13.7□□□□□ -0.22
PCF11-207ENST00000624931 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 HSD52Q0P140 79 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 BOD1L2Q8IYS8 172 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 PLXNB1O43157 2135 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 H0Y8G0 127 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 CNIH1O95406 144 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 HBDP02042 147 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 BMI1P35226 326 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 CRIP1P50238 77 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 PIFOQ8TCI5 191 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 SIGLEC8Q9NYZ4 499 aa13.7□□□□□ -0.22
PCF11-207ENST00000624931 ZANQ9Y493 2812 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 CREBBPQ92793 2442 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 SVEP1Q4LDE5 3571 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 GAGE10A6NGK3 116 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 C9orf118A6NHY6 69 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 FGF6P10767 208 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 IFI27P40305 119 aaPredicted RBP13.69□□□□□ -0.22
PCF11-207ENST00000624931 RNF151Q2KHN1 245 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 VPS25Q9BRG1 176 aa13.69□□□□□ -0.22
PCF11-207ENST00000624931 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
PCF11-207ENST00000624931 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
PCF11-207ENST00000624931 D6R8Y8 96 aa13.67□□□□□ -0.22
PCF11-207ENST00000624931 NBR2O15453 112 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms