RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	ARMS2	P0C7Q2	107 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	ZNF25	P17030	456 aa	Predicted RBP	13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967		Q6AWC8	147 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967		Q6ZN92	141 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	TEX29	Q8N6K0	151 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	LY6G6D	O95868	133 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	G0S2	P27469	103 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	HNRNPA3	P51991	378 aa	Known RBP	13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	RIG	Q13278	110 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	ARL6IP6	Q8N6S5	226 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	AAMDC	Q9H7C9	122 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	MAST4	O15021	2626 aa		13.56	□□□□□ -0.24
FAM3A-222	ENST00000621967	NPFF	O15130	113 aa		13.55	□□□□□ -0.24
FAM3A-222	ENST00000621967	COL5A1-AS1	Q5SY13	56 aa		13.55	□□□□□ -0.24
FAM3A-222	ENST00000621967	BRD3OS	Q6XYD6	125 aa		13.55	□□□□□ -0.24
FAM3A-222	ENST00000621967	THYN1	Q9P016	225 aa		13.55	□□□□□ -0.24
FAM3A-222	ENST00000621967	NDUFB8	O95169	186 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	OR5AL1	P0C617	328 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	SAA4	P35542	130 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	PSG9	Q00887	426 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	GAGE1	Q13065	139 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	BATF	Q16520	125 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	COX8C	Q7Z4L0	72 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	ASCL2	Q99929	193 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	TMEM208	Q9BTX3	173 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	LAMTOR2	Q9Y2Q5	125 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	MRPS16	Q9Y3D3	137 aa	Known RBP	13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	NCBP2L	A6PVI3	153 aa	Known RBP	13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	SYS1-DBNDD2	H3BUS1	97 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	DLEU1	O43261	78 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	LEPROTL1	O95214	131 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	EGR2	P11161	476 aa	Predicted RBP	13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	IGLL1	P15814	213 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	TSPO	P30536	169 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	C8orf49	Q96NF6	230 aa		13.54	□□□□□ -0.24
FAM3A-222	ENST00000621967	SON	P18583	2426 aa	Known RBP	13.53	□□□□□ -0.24
FAM3A-222	ENST00000621967	ZNF124	Q15973	351 aa		13.53	□□□□□ -0.24
FAM3A-222	ENST00000621967	PIP4P2	Q8N4L2	257 aa		13.53	□□□□□ -0.24
FAM3A-222	ENST00000621967	IGHV7-81	A0A0B4J1V7	117 aa		13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	TMEM11	P17152	192 aa		13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	RPL7	P18124	248 aa	Known RBP	13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	ZNF493	Q6ZR52	646 aa		13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	LINC00173	Q6ZV60	143 aa		13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	IL17REL	Q6ZVW7	336 aa		13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	F8	P00451	2351 aa		13.52	□□□□□ -0.24
FAM3A-222	ENST00000621967	HIVEP2	P31629	2446 aa		13.52	□□□□□ -0.25
FAM3A-222	ENST00000621967	CTSG	P08311	255 aa		13.52	□□□□□ -0.25
FAM3A-222	ENST00000621967	CT45A10	P0DMU9	189 aa		13.52	□□□□□ -0.25
FAM3A-222	ENST00000621967	CSN1S1	P47710	185 aa		13.52	□□□□□ -0.25
FAM3A-222	ENST00000621967		Q8N9W7	124 aa		13.52	□□□□□ -0.25
FAM3A-222	ENST00000621967	OR4C46	A6NHA9	309 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	FBLL1	A6NHQ2	334 aa	Known RBP	13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	SCGB2A1	O75556	95 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	FSHB	P01225	129 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	KLK9	Q2XQG4	91 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	KLK9	Q9UKQ9	250 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	OR2T8	A6NH00	312 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	PRB4	P10163	310 aa	Predicted RBP	13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	STPG4	Q8N801	248 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	TMEM160	Q9NX00	188 aa		13.51	□□□□□ -0.25
FAM3A-222	ENST00000621967	IGHV3-23	P01764	117 aa		13.5	□□□□□ -0.25
FAM3A-222	ENST00000621967	ZNF138	P52744	262 aa		13.5	□□□□□ -0.25
FAM3A-222	ENST00000621967	ANK3	Q12955	4377 aa	Known RBP	13.5	□□□□□ -0.25
FAM3A-222	ENST00000621967	SH2D1A	O60880	128 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	TFPI2	P48307	235 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	PET117	Q6UWS5	81 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	AJUBA	Q96IF1	538 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	ST20	Q9HBF5	79 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	RABAC1	Q9UI14	185 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	SMAD5-AS1	Q9Y6J3	95 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	SAPCD1	Q5SSQ6	148 aa		13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.49	□□□□□ -0.25
FAM3A-222	ENST00000621967	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	TMEM189	A5PLL7	270 aa		13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	IGKV2D-40	P01614	121 aa	Predicted RBP	13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	IGHG4	P01861	327 aa		13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	FAM106CP	P0CH98	169 aa		13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	PRR25	Q96S07	402 aa		13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	HSPB8	Q9UJY1	196 aa		13.48	□□□□□ -0.25
FAM3A-222	ENST00000621967	LYZL1	Q6UWQ5	148 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	MAP1LC3C	Q9BXW4	147 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	TMEM191A	Q9H0A3	160 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	AP5S1	Q9NUS5	200 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967		U3KQK5	164 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	CSN3	P07498	182 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	S100A7	P31151	101 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	C9orf139	Q6ZV77	190 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	ZNF502	Q8TBZ5	544 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	GOLT1B	Q9Y3E0	138 aa		13.47	□□□□□ -0.25
FAM3A-222	ENST00000621967	NPS	P0C0P6	89 aa		13.46	□□□□□ -0.25
FAM3A-222	ENST00000621967	REL	Q04864	619 aa	Predicted RBP	13.46	□□□□□ -0.25
FAM3A-222	ENST00000621967	SCGB2A2	Q13296	93 aa		13.46	□□□□□ -0.25
FAM3A-222	ENST00000621967	TPPP3	Q9BW30	176 aa		13.46	□□□□□ -0.25
FAM3A-222	ENST00000621967	ZFHX3	Q15911	3703 aa		13.46	□□□□□ -0.26
FAM3A-222	ENST00000621967	INAFM1	C9JVW0	142 aa		13.45	□□□□□ -0.26
FAM3A-222	ENST00000621967	MTOR	P42345	2549 aa		13.45	□□□□□ -0.26
FAM3A-222	ENST00000621967	SRD5A1	P18405	259 aa		13.45	□□□□□ -0.26
FAM3A-222	ENST00000621967	SRSF2	Q01130	221 aa	Known RBP	13.45	□□□□□ -0.26
FAM3A-222	ENST00000621967	DEFB112	Q30KQ8	113 aa		13.45	□□□□□ -0.26
FAM3A-222	ENST00000621967	LINC01545	Q5VT33	79 aa		13.45	□□□□□ -0.26

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