RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 GFI1BQ5VTD9 330 aa14.08□□□□□ -0.16
SEMA6C-210ENST00000621728 GRAMD2BQ96HH9 432 aa14.08□□□□□ -0.16
SEMA6C-210ENST00000621728 PACRGQ96M98 296 aaPredicted RBP14.08□□□□□ -0.16
SEMA6C-210ENST00000621728 HIST1H2BLQ99880 126 aa14.08□□□□□ -0.16
SEMA6C-210ENST00000621728 OTORQ9NRC9 128 aa14.08□□□□□ -0.16
SEMA6C-210ENST00000621728 ISLRO14498 428 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 GCGP01275 180 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 RPL11P62913 178 aaKnown RBP14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 RNF182Q8N6D2 247 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 AURKAIP1Q9NWT8 199 aaPredicted RBP14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 FABP4P15090 132 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 TCF24Q7RTU0 167 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 OR9G4Q8NGQ1 327 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 EPDR1Q9UM22 224 aa14.07□□□□□ -0.16
SEMA6C-210ENST00000621728 PEX7O00628 323 aa14.06□□□□□ -0.16
SEMA6C-210ENST00000621728 ERVFC1-1P60608 527 aa14.06□□□□□ -0.16
SEMA6C-210ENST00000621728 PDE6HQ13956 83 aa14.06□□□□□ -0.16
SEMA6C-210ENST00000621728 SMIM12Q96EX1 92 aa14.06□□□□□ -0.16
SEMA6C-210ENST00000621728 SGK494Q96LW2 274 aa14.06□□□□□ -0.16
SEMA6C-210ENST00000621728 ZNF331Q9NQX6 463 aaPredicted RBP14.06□□□□□ -0.16
SEMA6C-210ENST00000621728 TRAV8-2A0A0B4J237 113 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 TRAV34A0A0B4J273 112 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 GBGT1Q8N5D6 347 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 IGF2BP2-AS1Q96M15 143 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 V9GYV3 84 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 ZNF705FA8MVS1 300 aaPredicted RBP14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 NDUFA11Q86Y39 141 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 C5orf17Q8NAS9 161 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 TMEM18Q96B42 140 aa14.05□□□□□ -0.16
SEMA6C-210ENST00000621728 CSN3P07498 182 aa14.04□□□□□ -0.16
SEMA6C-210ENST00000621728 MT-ND6P03923 174 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 TCRAP04437 139 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 PSG9Q00887 426 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 PDZD11Q5EBL8 140 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 WDR73Q6P4I2 378 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 LYPD1Q8N2G4 141 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 AAMDCQ9H7C9 122 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 VWFP04275 2813 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 AMBPP02760 352 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 JOSD1Q15040 202 aaPredicted RBP14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 ZNF124Q15973 351 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 GOLT1AQ6ZVE7 132 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 FAM231DQ6ZW35 169 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 ARL6IP6Q8N6S5 226 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 CMTM2Q8TAZ6 248 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 PEMTQ9UBM1 199 aa14.03□□□□□ -0.16
SEMA6C-210ENST00000621728 TRAV8-1A0A0A6YYK1 113 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 SOCS3O14543 225 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 ZNF253O75346 499 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 TFPI2P48307 235 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 WFDC3Q8IUB2 231 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 C16orf92Q96LL3 132 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 C20orf173Q96LM9 149 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 ASCL2Q99929 193 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 ATG101Q9BSB4 218 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 GNB1LQ9BYB4 327 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 NRN1Q9NPD7 142 aa14.02□□□□□ -0.16
SEMA6C-210ENST00000621728 PRAC2D3DTV9 90 aa14.02□□□□□ -0.17
SEMA6C-210ENST00000621728 OVOL1O14753 267 aa14.02□□□□□ -0.17
SEMA6C-210ENST00000621728 CITED1Q99966 193 aa14.02□□□□□ -0.17
SEMA6C-210ENST00000621728 IGKV2-40A0A087WW87 121 aaPredicted RBP14.01□□□□□ -0.17
SEMA6C-210ENST00000621728 IGKV2D-40P01614 121 aaPredicted RBP14.01□□□□□ -0.17
SEMA6C-210ENST00000621728 IGLV2-8P01709 118 aa14.01□□□□□ -0.17
SEMA6C-210ENST00000621728 SLC50A1Q9BRV3 221 aa14.01□□□□□ -0.17
SEMA6C-210ENST00000621728 DIRC3C9JPN6 131 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 BMI1P35226 326 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 DEFB1P60022 68 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 MS4A6AQ9H2W1 248 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 SMIM27A0A1W2PRY6 76 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 M0QZ24 198 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 TMEM183BQ1AE95 376 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 IBA57Q5T440 356 aaKnown RBP14□□□□□ -0.17
SEMA6C-210ENST00000621728 LCN12Q6JVE5 192 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 RASL11AQ6T310 242 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 NHLRC2Q8NBF2 726 aa14□□□□□ -0.17
SEMA6C-210ENST00000621728 OR5I1Q13606 314 aa13.99□□□□□ -0.17
SEMA6C-210ENST00000621728 SPATA3Q8NHX4 192 aa13.99□□□□□ -0.17
SEMA6C-210ENST00000621728 DCANP1Q8TF63 244 aa13.99□□□□□ -0.17
SEMA6C-210ENST00000621728 KLF12Q9Y4X4 402 aa13.99□□□□□ -0.17
SEMA6C-210ENST00000621728 IGLV2-11P01706 119 aa13.98□□□□□ -0.17
SEMA6C-210ENST00000621728 DYNLRB2Q8TF09 96 aa13.98□□□□□ -0.17
SEMA6C-210ENST00000621728 ESDP10768 282 aa13.98□□□□□ -0.17
SEMA6C-210ENST00000621728 MRPL18Q9H0U6 180 aaKnown RBP13.98□□□□□ -0.17
SEMA6C-210ENST00000621728 CSN1S1P47710 185 aa13.97□□□□□ -0.17
SEMA6C-210ENST00000621728 UBE2G1P62253 170 aa13.97□□□□□ -0.17
SEMA6C-210ENST00000621728 PSG3Q16557 428 aa13.97□□□□□ -0.17
SEMA6C-210ENST00000621728 BAGE2Q86Y30 109 aa13.97□□□□□ -0.17
SEMA6C-210ENST00000621728 TMEM61Q8N0U2 210 aa13.97□□□□□ -0.17
SEMA6C-210ENST00000621728 VGLL1Q99990 258 aa13.97□□□□□ -0.17
SEMA6C-210ENST00000621728 PF4P02776 101 aa13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 ZNF705DP0CH99 300 aaPredicted RBP13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 ZNF705BP0CI00 300 aaPredicted RBP13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 MGST1P10620 155 aaKnown RBP13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 PKIAP61925 76 aa13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 PAFAH1B2P68402 229 aa13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 Q0VG73 95 aa13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 ERCC8Q13216 396 aa13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 DEFB114Q30KQ6 69 aa13.96□□□□□ -0.17
SEMA6C-210ENST00000621728 IZUMO1RA6ND01 250 aa13.96□□□□□ -0.18
SEMA6C-210ENST00000621728 CD300EQ496F6 205 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms