RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 IGHV3-38A0A0C4DH36 116 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 PSCAO43653 123 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 K7ENP7 123 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
COL4A6-210ENST00000621266 DUX4L9Q6RFH8 374 aaPredicted RBP7.98□□□□□ -1.13
COL4A6-210ENST00000621266 C9orf139Q6ZV77 190 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 NCOR1O75376 2440 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 PSPNO60542 156 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 CRYGCP07315 174 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 CFHR3Q02985 330 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 DTX1Q86Y01 620 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 LYPD1Q8N2G4 141 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 TMEM75Q8N9X5 138 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 PRSS22Q9GZN4 317 aa7.98□□□□□ -1.13
COL4A6-210ENST00000621266 TMEM200BQ69YZ2 307 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 PCP2Q8IVA1 136 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 IGHV1-3A0A0C4DH29 117 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 I3L3M4 83 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 SIVA1O15304 175 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 C10orf91Q5T1B1 145 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 ZNF726P1Q15940 193 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 ZNF492Q9P255 531 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 NDUFS7O75251 213 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 YPEL3P61236 119 aaPredicted RBP7.97□□□□□ -1.13
COL4A6-210ENST00000621266 HERV-K104P63124 156 aa7.97□□□□□ -1.13
COL4A6-210ENST00000621266 TRAV13-2A0A0B4J235 113 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 C5orf63A6NC05 138 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 H0YJW9 148 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 DEFB125Q8N687 156 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 NKAPP1Q8N9T2 125 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 J3QQQ9 107 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 CD177Q8N6Q3 437 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.13
COL4A6-210ENST00000621266 RIF1Q5UIP0 2472 aaKnown RBP7.96□□□□□ -1.13
COL4A6-210ENST00000621266 ZNF318Q5VUA4 2279 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 CFC1BP0CG36 223 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 CFC1P0CG37 223 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 C8orf86Q6ZUL3 223 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 SDK2Q58EX2 2172 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 IGHV1-18A0A0C4DH31 117 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 A0A0U1RQV1 116 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 RNASE2P10153 161 aaKnown RBP7.96□□□□□ -1.14
COL4A6-210ENST00000621266 KLK9Q9UKQ9 250 aa7.96□□□□□ -1.14
COL4A6-210ENST00000621266 VMO1Q7Z5L0 202 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 WIPF2Q8TF74 440 aaPredicted RBP7.95□□□□□ -1.14
COL4A6-210ENST00000621266 PLXNA4Q9HCM2 1894 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 F6UB75 175 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 WFDC2Q14508 124 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 Q8NFD4 153 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 TMEM190Q8WZ59 177 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 SLX1AQ9BQ83 275 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 ZNF561-AS1K7EIQ3 104 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 DEFB130BP0DP73 79 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 DEFB130AP0DP74 79 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 ESPL1Q14674 2120 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 DOCK11Q5JSL3 2073 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 ATOX1O00244 68 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 IGLL5B9A064 214 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 F8VRH5 84 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 IGHV1-46P01743 117 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 IGLC1P0CG04 106 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 CRYGSP22914 178 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 THAP8Q8NA92 274 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 HS3ST6Q96QI5 342 aa7.95□□□□□ -1.14
COL4A6-210ENST00000621266 TRBV7-1A0A0A6YYK4 115 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 IGHV4-28A0A0C4DH34 117 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 PSMB8P28062 276 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 EFNA2O43921 213 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 IGHV1-8P0DP01 117 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 DSCR9P59020 149 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 BRD3OSQ6XYD6 125 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 KIR2DL5BA0A0G2JN68 375 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 KIR2DL5BA0A0G2JPC4 375 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 SDHAF1A6NFY7 115 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 RHODO00212 210 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 KLF5Q13887 457 aaPredicted RBP7.94□□□□□ -1.14
COL4A6-210ENST00000621266 KIR2DL5AQ8N109 375 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 PLXNA3P51805 1871 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 LY6HO94772 140 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 QRFPP83859 136 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 ORMDL1Q9P0S3 153 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 PKIGQ9Y2B9 76 aa7.94□□□□□ -1.14
COL4A6-210ENST00000621266 A0A0B4J2C4 111 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 ACYP1P07311 99 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 TDRG1Q3Y452 100 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 C20orf204Q6ZNR8 217 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 FOXI2Q6ZQN5 318 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
COL4A6-210ENST00000621266 ACACAQ13085 2346 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 IGHV4-4A0A075B6R2 117 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 DIDO1Q9BTC0 2240 aaKnown RBP7.93□□□□□ -1.14
COL4A6-210ENST00000621266 DOCK4Q8N1I0 1966 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 FAM110DQ8TAY7 271 aaPredicted RBP7.93□□□□□ -1.14
COL4A6-210ENST00000621266 CR1LQ2VPA4 569 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 RHPN1-AS1Q9BWJ2 59 aa7.93□□□□□ -1.14
COL4A6-210ENST00000621266 TRBV25-1A0A075B6N4 114 aa7.92□□□□□ -1.14
COL4A6-210ENST00000621266 GGNQ86UU5 652 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms