RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FCER1GP30273 86 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 CEACAM3P40198 252 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 LY6G5BQ8NDX9 201 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 HIGD1BQ9P298 99 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 ARHGAP32A7KAX9 2087 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 APC2O95996 2303 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 NDPQ00604 133 aa15.21■□□□□ 0.03
PDLIM3-212ENST00000620787 TPRP12270 2363 aaKnown RBP15.21■□□□□ 0.02
PDLIM3-212ENST00000620787 FXYD2P54710 66 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 ZNF562Q6V9R5 426 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 OR11H6Q8NGC7 330 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 TTTY13Q9BZ97 58 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 TNFRSF6BO95407 300 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 ORM1P02763 201 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 SMIM13P0DJ93 91 aa15.2■□□□□ 0.02
PDLIM3-212ENST00000620787 AKAP13Q12802 2813 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 FABP2P12104 132 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 SAMD5Q5TGI4 173 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 TTC9CQ8N5M4 171 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 ARPC1AQ92747 370 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 NXT2Q9NPJ8 142 aaKnown RBP15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 ZNF318Q5VUA4 2279 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 ATMQ13315 3056 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 CD3EP07766 207 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 GCSHP23434 173 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 KLRD1Q13241 179 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 HES1Q14469 280 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 PSMG4Q5JS54 123 aa15.19■□□□□ 0.02
PDLIM3-212ENST00000620787 EVI2AP22794 236 aa15.18■□□□□ 0.02
PDLIM3-212ENST00000620787 CHAC1Q9BUX1 264 aa15.18■□□□□ 0.02
PDLIM3-212ENST00000620787 ANKRD11Q6UB99 2663 aaPredicted RBP15.18■□□□□ 0.02
PDLIM3-212ENST00000620787 GATA1P15976 413 aaPredicted RBP15.18■□□□□ 0.02
PDLIM3-212ENST00000620787 Q8NA96 180 aa15.18■□□□□ 0.02
PDLIM3-212ENST00000620787 FABP5P3A8MUU1 101 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 IGKCP01834 107 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 CTSGP08311 255 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 DYNAPQ8N1N2 210 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 TMEM238C9JI98 176 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 PRSS1P07477 247 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 ERCC8Q13216 396 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 LINC01559Q495D7 138 aa15.17■□□□□ 0.02
PDLIM3-212ENST00000620787 ODF3BA8MYP8 253 aa15.16■□□□□ 0.02
PDLIM3-212ENST00000620787 ZNF672Q499Z4 452 aaPredicted RBP15.16■□□□□ 0.02
PDLIM3-212ENST00000620787 TMEM158Q8WZ71 300 aa15.16■□□□□ 0.02
PDLIM3-212ENST00000620787 PHLDA1Q8WV24 401 aaPredicted RBP15.16■□□□□ 0.02
PDLIM3-212ENST00000620787 FOXC2Q99958 501 aa15.16■□□□□ 0.02
PDLIM3-212ENST00000620787 IGHV3OR16-8A0A075B7F1 116 aa15.15■□□□□ 0.02
PDLIM3-212ENST00000620787 PRAC2D3DTV9 90 aa15.15■□□□□ 0.02
PDLIM3-212ENST00000620787 PPIFP30405 207 aaKnown RBP15.15■□□□□ 0.02
PDLIM3-212ENST00000620787 IGLV2-18A0A075B6J9 118 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 TRBV25-1A0A075B6N4 114 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 K7ERJ3 54 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 SMIM17P0DL12 118 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 GTSCR1Q86UQ5 136 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 DTX2Q86UW9 622 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 CSMD1Q96PZ7 3565 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 Q8N8P6 123 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 DCHS2Q6V1P9 2916 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 PIEZO2Q9H5I5 2752 aa15.14■□□□□ 0.01
PDLIM3-212ENST00000620787 DPM2O94777 84 aa15.13■□□□□ 0.01
PDLIM3-212ENST00000620787 ATP5LO75964 103 aa15.13■□□□□ 0.01
PDLIM3-212ENST00000620787 ZC2HC1BQ5TFG8 222 aa15.13■□□□□ 0.01
PDLIM3-212ENST00000620787 SMPXQ9UHP9 88 aa15.13■□□□□ 0.01
PDLIM3-212ENST00000620787 TMEM8BA6NDV4 472 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 NCBP2LA6PVI3 153 aaKnown RBP15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 HLA-DRB4P13762 266 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 IL17RELQ6ZVW7 336 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 HLA-DRB4X5D2U9 266 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 ACACAQ13085 2346 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 IGHV3-35A0A0C4DH35 117 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 PRR30Q53SZ7 412 aaPredicted RBP15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 Q8N6K4 173 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 TM2D2Q9BX73 214 aa15.12■□□□□ 0.01
PDLIM3-212ENST00000620787 TRGV3P03979 118 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 CEND1Q8N111 149 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 RNF182Q8N6D2 247 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 IGKV3D-20A0A0C4DH25 116 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 SCGB2A1O75556 95 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 LY6HO94772 140 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 LINC01560Q8TB33 94 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 C11orf21Q9P2W6 132 aa15.11■□□□□ 0.01
PDLIM3-212ENST00000620787 M0R1W7 72 aa15.1■□□□□ 0.01
PDLIM3-212ENST00000620787 NHP2Q9NX24 153 aaKnown RBP15.1■□□□□ 0.01
PDLIM3-212ENST00000620787 RBAKDNA6NC62 111 aa15.1■□□□□ 0.01
PDLIM3-212ENST00000620787 PRTN3P24158 256 aa15.1■□□□□ 0.01
PDLIM3-212ENST00000620787 LRBAP50851 2863 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 TRAV40A0A0B4J280 105 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 TEX48A0A1B0GUV7 120 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 MRPL35Q9NZE8 188 aaKnown RBP15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 SRSF1Q07955 248 aaKnown RBP eCLIP15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 NRACQ8N912 160 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 ZFAND3Q9H8U3 227 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 TMEM160Q9NX00 188 aa15.09■□□□□ 0.01
PDLIM3-212ENST00000620787 IGHV7-81A0A0B4J1V7 117 aa15.08■□□□□ 0
PDLIM3-212ENST00000620787 RPL24P83731 157 aaKnown RBP15.08■□□□□ 0
PDLIM3-212ENST00000620787 MAPKAPK5-AS1Q8N8E1 139 aa15.08■□□□□ 0
PDLIM3-212ENST00000620787 PRSS47A8MTI9 375 aa15.07■□□□□ 0
PDLIM3-212ENST00000620787 K7EMI3 77 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms