RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 VN1R17PQ8TDU5 208 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 CHEK1O14757 476 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 HBBP68871 147 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 ATP5G2Q06055 141 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 C18orf32Q8TCD1 76 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 EEF1AKMT3Q96AZ1 226 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 ZNF479Q96JC4 524 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
CIITA-212ENST00000618207 A0A1W2PS18 150 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 Q0VG73 95 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 TMEM75Q8N9X5 138 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 OR4C5Q8NGB2 326 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
CIITA-212ENST00000618207 PRRC2AP48634 2157 aaKnown RBP9.59□□□□□ -0.87
CIITA-212ENST00000618207 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 PF4V1P10720 104 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 KRTAP10-9P60411 292 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 RNASEKQ6P5S7 137 aaKnown RBP9.59□□□□□ -0.87
CIITA-212ENST00000618207 RBPMS2Q6ZRY4 209 aaKnown RBP9.59□□□□□ -0.87
CIITA-212ENST00000618207 KLK15Q9H2R5 256 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 SRSF1Q07955 248 aaKnown RBP eCLIP9.59□□□□□ -0.87
CIITA-212ENST00000618207 LYPD1Q8N2G4 141 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 ZNF492Q9P255 531 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
CIITA-212ENST00000618207 POLR3KQ9Y2Y1 108 aaPredicted RBP9.59□□□□□ -0.87
CIITA-212ENST00000618207 BUB3O43684 328 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 TGFAP01135 160 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 GPX1P07203 203 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 COX6B1P14854 86 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 COX19Q49B96 90 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 MIEN1Q9BRT3 115 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 UBR5O95071 2799 aaPredicted RBP9.58□□□□□ -0.88
CIITA-212ENST00000618207 CLPSL1A2RUU4 121 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 CSN3P07498 182 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 ZNF138P52744 262 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 PSG9Q00887 426 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 ZNF843Q8N446 348 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 CST9LQ9H4G1 147 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 NRN1Q9NPD7 142 aa9.58□□□□□ -0.88
CIITA-212ENST00000618207 A0A1B0GXF2 115 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 B4DSR2 109 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 IGHG4P01861 327 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 PDE6HQ13956 83 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 LCN12Q6JVE5 192 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 KCNS1Q96KK3 526 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
CIITA-212ENST00000618207 A0A1B0GV72 72 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 HSBP1O75506 76 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 UNQ9165/PRO28630Q6UXU0 137 aa9.57□□□□□ -0.88
CIITA-212ENST00000618207 CHD6Q8TD26 2715 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 K7ERU9 68 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 ARL3P36405 182 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 ZNF80P51504 273 aaPredicted RBP9.56□□□□□ -0.88
CIITA-212ENST00000618207 SHISA2Q6UWI4 295 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 WIPF2Q8TF74 440 aaPredicted RBP9.56□□□□□ -0.88
CIITA-212ENST00000618207 METTL26Q96S19 204 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 PAM16Q9Y3D7 125 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 NBPF19A0A087WUL8 3843 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 NPIPB6E9PJ23 425 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 SH2D1AO60880 128 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 ZNF324O75467 553 aaPredicted RBP9.56□□□□□ -0.88
CIITA-212ENST00000618207 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
CIITA-212ENST00000618207 MEGF9Q9H1U4 602 aa9.56□□□□□ -0.88
CIITA-212ENST00000618207 DEFB1P60022 68 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 RPS20P60866 119 aaKnown RBP9.55□□□□□ -0.88
CIITA-212ENST00000618207 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 PRR25Q96S07 402 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 TRBV7-1A0A0A6YYK4 115 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 IGHV4-59P01825 116 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 PPIFP30405 207 aaKnown RBP9.55□□□□□ -0.88
CIITA-212ENST00000618207 C10orf99Q6UWK7 81 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 TMEM189A5PLL7 270 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 ORM1P02763 201 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 CT83Q5H943 113 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 RASL11AQ6T310 242 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 ATP5L2Q7Z4Y8 100 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 APCP25054 2843 aa9.55□□□□□ -0.88
CIITA-212ENST00000618207 ACANP16112 2415 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 TMEM213A2RRL7 107 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 DEFB112Q30KQ8 113 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 ZNF738Q8NE65 137 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 M0R2Z0 102 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 ESDP10768 282 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 SRD5A1P18405 259 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 IL17RELQ6ZVW7 336 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 NIT1Q86X76 327 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
CIITA-212ENST00000618207 DUX5Q96PT3 197 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms