RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 C15orf62A8K5M9 175 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 IGLV1-44P01699 117 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 ZNF876PQ49A33 203 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 ALKAL2Q6UX46 152 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 VAX2Q9UIW0 290 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 CENPVL1A0A0U1RR11 272 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 Q96M66 194 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 GRIFINA4D1Z8 144 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 C16orf95Q9H693 158 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 MRPS18AQ9NVS2 196 aaKnown RBP2.65□□□□□ -1.99
LPP-220ENST00000617246 HHLA3Q9XRX5 114 aa2.65□□□□□ -1.99
LPP-220ENST00000617246 IGKV1-8A0A0C4DH67 115 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 M0R2N4 97 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 SPINK4O60575 86 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 CFHR3Q02985 330 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 OR10G8Q8NGN5 311 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 RSPO3Q9BXY4 272 aaPredicted RBP2.64□□□□□ -1.99
LPP-220ENST00000617246 NDUFS6O75380 124 aaKnown RBP2.64□□□□□ -1.99
LPP-220ENST00000617246 TRBV9A0A0B4J1U6 114 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 PPBPP02775 128 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 LINC00271P0C7V0 271 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 ZFP2Q6ZN57 461 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 CUL9Q8IWT3 2517 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 TRBV5-5A0A0J9YX44 114 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 FOXL2P58012 376 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 FABP5Q01469 135 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 ARFGEF3Q5TH69 2177 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 RTTNQ86VV8 2226 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 C17orf98A8MV24 154 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 LGALS9O00182 355 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 TCRBP04435 133 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 DAPP51397 102 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 CRIPAKQ8N1N5 446 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 TRAV2A0A0B4J234 112 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 CD24P25063 80 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 C12orf73Q69YU5 71 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 VSIG8P0DPA2 414 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 XCL1P47992 114 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 FUNDC1Q8IVP5 155 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 A0A096LPF7 62 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 MYMXA0A1B0GTQ4 84 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 C19orf84I3L1E1 186 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 OR11H6Q8NGC7 330 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 PPP1R3EQ9H7J1 279 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 TRGV9Q99603 122 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 GSN-AS1Q9NRJ2 163 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 LOC107984640A0A0U1RRK4 108 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 RPL28P46779 137 aaKnown RBP2.64□□□□□ -1.99
LPP-220ENST00000617246 C5orf66Q9H5L9 145 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 CHKB-CPT1BH3BT56 60 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 M0R143 59 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 C6orf223Q8N319 242 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 NCOA6Q14686 2063 aaPredicted RBP2.64□□□□□ -1.99
LPP-220ENST00000617246 H0YJW9 148 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 I3L3M4 83 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 TCL1BO95988 128 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 CRYGBP07316 175 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 NDPQ00604 133 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 HS3ST6Q96QI5 342 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 NDUFB6O95139 128 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 STAG3L3P0CL85 134 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 SUMO4Q6EEV6 95 aa2.64□□□□□ -1.99
LPP-220ENST00000617246 H3BVH4 76 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 FUSP35637 526 aaKnown RBP eCLIP2.63□□□□□ -1.99
LPP-220ENST00000617246 Q6ZQT7 251 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 SMIM4Q8WVI0 70 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 LENEPQ9Y5L5 61 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 MMP23AO75900 390 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 FRMD6-AS1P0C7T7 363 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 TMEM88Q6PEY1 159 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 NIT2Q9NQR4 276 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 BSXQ3C1V8 233 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 RP1L1Q8IWN7 2480 aaPredicted RBP2.63□□□□□ -1.99
LPP-220ENST00000617246 COL6A6A6NMZ7 2263 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 CCSO14618 274 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 SOCS1O15524 211 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 SPTSSBQ8NFR3 76 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 RNF126Q9BV68 326 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 MAP6D1Q9H9H5 199 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 TRAV4A0A0B4J268 109 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 ODF3BA8MYP8 253 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 DKK1O94907 266 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 HIST3H3Q16695 136 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 FAM74A7A6NL05 159 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 CST7O76096 145 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 SSBP2P81877 361 aaPredicted RBP2.63□□□□□ -1.99
LPP-220ENST00000617246 GCSAMLQ5JQS6 135 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 F5P12259 2224 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 IGHV3OR16-8A0A075B7F1 116 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 NPSP0C0P6 89 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 HLA-DMBP28068 263 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 TMEM241Q24JQ0 296 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 RPRMLQ8N4K4 120 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 C5orf56Q8N8D9 126 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 TMEM222Q9H0R3 208 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 DANCRP0C864 163 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 Q6ZSV7 163 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 DOPEY2Q9Y3R5 2298 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 MORN5Q5VZ52 161 aa2.63□□□□□ -1.99
LPP-220ENST00000617246 SLC25A39Q9BZJ4 359 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms