RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
NR1H3-235ENST00000616973 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
NR1H3-235ENST00000616973 IGHV4-31P0DP07 118 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 CD33P20138 364 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 ERCC8Q13216 396 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 CYB5R2Q6BCY4 276 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 UNQ9165/PRO28630Q6UXU0 137 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
NR1H3-235ENST00000616973 TMEM89A2RUT3 159 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 CTRLP40313 264 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 DEFA6Q01524 100 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 LYZL1Q6UWQ5 148 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 CHCHD1Q96BP2 118 aaKnown RBP12.02□□□□□ -0.49
NR1H3-235ENST00000616973 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 AGPAT4-IT1Q9H0P7 198 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 RNF114Q9Y508 228 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
NR1H3-235ENST00000616973 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 IGLC6P0CF74 106 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 FAM19A2Q8N3H0 131 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 PSMG3-AS1Q96PY0 264 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 SMAD7O15105 426 aaKnown RBP12.01□□□□□ -0.49
NR1H3-235ENST00000616973 ZNF138P52744 262 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 KRTDAPP60985 99 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 LINC01559Q495D7 138 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 RNASEKQ6P5S7 137 aaKnown RBP12.01□□□□□ -0.49
NR1H3-235ENST00000616973 Q8N976 141 aa12.01□□□□□ -0.49
NR1H3-235ENST00000616973 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
NR1H3-235ENST00000616973 NTF3P20783 257 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 PSMB8P28062 276 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 TMEM78Q5T7P6 136 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 REC114Q7Z4M0 266 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 ZNF575Q86XF7 245 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 MAPK1IP1LQ8NDC0 245 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 C16orf92Q96LL3 132 aa12□□□□□ -0.49
NR1H3-235ENST00000616973 TMSB15BA0A087X1C1 80 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 HIST1H1AQ02539 215 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-235ENST00000616973 PRR31Q5SQ13 230 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 IL17RELQ6ZVW7 336 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 LENEPQ9Y5L5 61 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 UBR5O95071 2799 aaPredicted RBP11.99□□□□□ -0.49
NR1H3-235ENST00000616973 ANKRD17O75179 2603 aaKnown RBP11.99□□□□□ -0.49
NR1H3-235ENST00000616973 K7EMT4 169 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 M0R2Z0 102 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 SOCS3O14543 225 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 C3orf79P0CE67 100 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 Q5PR19 223 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 Q6YL49 198 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 C14orf144Q96I85 54 aa11.99□□□□□ -0.49
NR1H3-235ENST00000616973 PEF1Q9UBV8 284 aaKnown RBP11.99□□□□□ -0.49
NR1H3-235ENST00000616973 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
NR1H3-235ENST00000616973 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 LINC00614P0C842 121 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 RAB4AP20338 218 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 NDUFAF3Q9BU61 184 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 VPREB3Q9UKI3 123 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 CHD6Q8TD26 2715 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 FAM181BA6NEQ2 426 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 ORM1P02763 201 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 PRSS57Q6UWY2 283 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 LCNL1Q6ZST4 164 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 C20orf144Q9BQM9 153 aa11.98□□□□□ -0.49
NR1H3-235ENST00000616973 DAZ1Q9NQZ3 744 aaKnown RBP11.98□□□□□ -0.49
NR1H3-235ENST00000616973 TMEM213A2RRL7 107 aa11.97□□□□□ -0.49
NR1H3-235ENST00000616973 TMEM95Q3KNT9 176 aa11.97□□□□□ -0.49
NR1H3-235ENST00000616973 FAM104BQ5XKR9 115 aa11.97□□□□□ -0.49
NR1H3-235ENST00000616973 C20orf173Q96LM9 149 aa11.97□□□□□ -0.49
NR1H3-235ENST00000616973 U3KQK5 164 aa11.97□□□□□ -0.49
NR1H3-235ENST00000616973 OVOL1O14753 267 aa11.96□□□□□ -0.49
NR1H3-235ENST00000616973 FAM106AQ4KMX7 169 aa11.96□□□□□ -0.5
NR1H3-235ENST00000616973 LBHQ53QV2 105 aaPredicted RBP11.96□□□□□ -0.5
NR1H3-235ENST00000616973 ZNF738Q8NE65 137 aa11.96□□□□□ -0.5
NR1H3-235ENST00000616973 VAMP8Q9BV40 100 aa11.96□□□□□ -0.5
NR1H3-235ENST00000616973 SMPXQ9UHP9 88 aa11.96□□□□□ -0.5
NR1H3-235ENST00000616973 C2orf70A6NJV1 201 aa11.95□□□□□ -0.5
NR1H3-235ENST00000616973 LINC00477Q96M19 166 aa11.95□□□□□ -0.5
NR1H3-235ENST00000616973 RHPN1-AS1Q9BWJ2 59 aa11.95□□□□□ -0.5
NR1H3-235ENST00000616973 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
NR1H3-235ENST00000616973 CSPG4Q6UVK1 2322 aa11.95□□□□□ -0.5
NR1H3-235ENST00000616973 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 M0QZ24 198 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 OR5AL1P0C617 328 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 BTF3P20290 206 aaKnown RBP11.94□□□□□ -0.5
NR1H3-235ENST00000616973 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 EBLN2Q6P2I7 272 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 KRTAP1-3Q8IUG1 177 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 Q96MF0 132 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
NR1H3-235ENST00000616973 TMEM191AQ9H0A3 160 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms