RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 HLA-DMBP28068 263 aa10.86□□□□□ -0.67
CACNA1C-231ENST00000616390 URB1-AS1Q96HZ7 61 aa10.86□□□□□ -0.67
CACNA1C-231ENST00000616390 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
CACNA1C-231ENST00000616390 BPESC1Q9GZL8 116 aa10.86□□□□□ -0.67
CACNA1C-231ENST00000616390 WI2-2373I1.2A0A1W2PRP0 233 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 FER1L6-AS1Q8NA97 138 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 LAMTOR2Q9Y2Q5 125 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 IGHV7-81A0A0B4J1V7 117 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 CRIP1P50238 77 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 LINC00173Q6ZV60 143 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 OR4B1Q8NGF8 309 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 LINC01548A6NM66 108 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 GPR183P32249 361 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 Q8TAT8 98 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 THYN1Q9P016 225 aa10.85□□□□□ -0.67
CACNA1C-231ENST00000616390 PKD1L2Q7Z442 2459 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 NPIPB5A8MRT5 1133 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 C19orf84I3L1E1 186 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 TTC9CQ8N5M4 171 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 LINC00527Q9UJ94 153 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 FLNCQ14315 2725 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 G3V318 75 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 MRPS12O15235 138 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 EGR2P11161 476 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 SAA4P35542 130 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 KLF5Q13887 457 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 SPATA12Q7Z6I5 190 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 DTX2Q86UW9 622 aa10.84□□□□□ -0.67
CACNA1C-231ENST00000616390 CTSGP08311 255 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 FAM106CPP0CH98 169 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 CT45A10P0DMU9 189 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 CSN1S1P47710 185 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 CT83Q5H943 113 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 Q6ZN92 141 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 Q8N9W7 124 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 C1RLQ9NZP8 487 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 ZNF207O43670 478 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 C15orf32Q32M92 178 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 TMEM219Q86XT9 240 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 SIRPDQ9H106 197 aa10.83□□□□□ -0.68
CACNA1C-231ENST00000616390 A0A1B0GUT8 65 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 NPIPB6E9PJ23 425 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 ATP6V0E1O15342 81 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 GNLYP22749 145 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 GAGE5Q13069 117 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 GAGE6Q13070 117 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 CSMD2Q7Z408 3487 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 TP73-AS1Q9UF72 201 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 RABAC1Q9UI14 185 aa10.82□□□□□ -0.68
CACNA1C-231ENST00000616390 CFAP46Q8IYW2 2715 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 IGHV1-24A0A0C4DH33 117 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 ERASQ7Z444 233 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 Q8N6K4 173 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 CENPEQ02224 2701 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 CTRLP40313 264 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 VGLL1Q99990 258 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 PMCHL2Q9BQD1 86 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 ABCA2Q9BZC7 2435 aa10.81□□□□□ -0.68
CACNA1C-231ENST00000616390 C2orf70A6NJV1 201 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 MINOS1Q5TGZ0 78 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 CSPG4Q6UVK1 2322 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 TMEM213A2RRL7 107 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 EFNA4P52798 201 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 LYPD1Q8N2G4 141 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 RNF182Q8N6D2 247 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 SOX21Q9Y651 276 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 HAX1O00165 279 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 IGLC3P0DOY3 106 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 LYZL1Q6UWQ5 148 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
CACNA1C-231ENST00000616390 TMEM189A5PLL7 270 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 SH2D1AO60880 128 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 RPL7P18124 248 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 ERCC8Q13216 396 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 RIGQ13278 110 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 BRD3OSQ6XYD6 125 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 NRGNQ92686 78 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 FXYD7P58549 80 aa10.79□□□□□ -0.68
CACNA1C-231ENST00000616390 UBE2E1P51965 193 aa10.78□□□□□ -0.68
CACNA1C-231ENST00000616390 LMO4P61968 165 aa10.78□□□□□ -0.68
CACNA1C-231ENST00000616390 ITLN2Q8WWU7 325 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-231ENST00000616390 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
CACNA1C-231ENST00000616390 FAM231BA6NCW3 169 aa10.78□□□□□ -0.68
CACNA1C-231ENST00000616390 IGLL1P15814 213 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms