RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 OR11H12B2RN74 326 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 PRRG2O14669 202 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 SPRY2O43597 315 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 MC5RP33032 325 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 PPP1R27Q86WC6 154 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 OR11H1Q8NG94 326 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 OR11H2Q8NH07 326 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 DMXL2Q8TDJ6 3036 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 LHBP01229 141 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 ODF1Q14990 250 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 ZNF562Q6V9R5 426 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 DPF1Q92782 380 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 MRAP2Q96G30 205 aa5.26□□□□□ -1.57
LMO3-235ENST00000616247 TNRC6BQ9UPQ9 1833 aaKnown RBP5.26□□□□□ -1.57
LMO3-235ENST00000616247 TACC2O95359 2948 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 A0A1W2PNU3 283 aaPredicted RBP5.25□□□□□ -1.57
LMO3-235ENST00000616247 HOXA3O43365 443 aaPredicted RBP5.25□□□□□ -1.57
LMO3-235ENST00000616247 CD40P25942 277 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 EMP1P54849 157 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 ERCC8Q13216 396 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 C3orf36Q3SXR2 165 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 SIGLEC15Q6ZMC9 328 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 LINC01549A6NIU2 74 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 IGKV1-17P01599 117 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 IGLV1-44P01699 117 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 MT-ATP8P03928 68 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 WT1P19544 449 aaPredicted RBP5.25□□□□□ -1.57
LMO3-235ENST00000616247 SPANXN1Q5VSR9 72 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 C1orf162Q8NEQ5 155 aaPredicted RBP5.25□□□□□ -1.57
LMO3-235ENST00000616247 ANAPC13Q9BS18 74 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 SIGLEC9Q9Y336 463 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 LYNX1G3V0Z9 82 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 IGLV2-23P01705 113 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 LYNX1P0DP58 116 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 DEFB109BQ30KR1 87 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 SHANK2-AS3Q9BTD1 123 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 KALRNO60229 2985 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 CFAP47Q6ZTR5 3102 aa5.25□□□□□ -1.57
LMO3-235ENST00000616247 E9PLD3 99 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 SCGB1A1P11684 91 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 ZNF80P51504 273 aaPredicted RBP5.24□□□□□ -1.57
LMO3-235ENST00000616247 RRN3P1Q2M238 152 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 ZNF474Q6S9Z5 364 aaPredicted RBP5.24□□□□□ -1.57
LMO3-235ENST00000616247 IGF2-ASQ6U949 168 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 NXT2Q9NPJ8 142 aaKnown RBP5.24□□□□□ -1.57
LMO3-235ENST00000616247 ONECUT1Q9UBC0 465 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 WI2-2373I1.2A0A1W2PRP0 233 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 ATP5LO75964 103 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 HLA-DRB4P13762 266 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 RPL7P18124 248 aaKnown RBP5.24□□□□□ -1.57
LMO3-235ENST00000616247 PRTN3P24158 256 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 C8orf86Q6ZUL3 223 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 RNF183Q96D59 192 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 PLSCR4Q9NRQ2 329 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 RAXQ9Y2V3 346 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 HLA-DRB4X5D2U9 266 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 COL6A6A6NMZ7 2263 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 ARHGAP32A7KAX9 2087 aa5.24□□□□□ -1.57
LMO3-235ENST00000616247 TRAV17A0A0B4J275 112 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 B5MCH6 92 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 C16orf97H3BN30 126 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 GATA3P23771 443 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 C22orf34Q6ZV56 151 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 PRR25Q96S07 402 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 HHLA3Q9XRX5 114 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 ZNF815PA8K554 130 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 CRYGCP07315 174 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 MGPP08493 103 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 ZFP2Q6ZN57 461 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 DTX2Q86UW9 622 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 ZNF491Q8N8L2 437 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 ZNF48Q96MX3 618 aaPredicted RBP5.23□□□□□ -1.57
LMO3-235ENST00000616247 SCGB3A1Q96QR1 104 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 NOTCH3Q9UM47 2321 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 PRSS29PA6NIE9 313 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 FABP5P3A8MUU1 101 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 M0R381 172 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 RNF182Q8N6D2 247 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 ADGRG4Q8IZF6 3080 aa5.23□□□□□ -1.57
LMO3-235ENST00000616247 MGAQ8IWI9 3026 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 TTC28Q96AY4 2481 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 BDP1A6H8Y1 2624 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 TRGV3P03979 118 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 IGHV1-8P0DP01 117 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 S100A4P26447 101 aaKnown RBP5.22□□□□□ -1.57
LMO3-235ENST00000616247 FOXI1Q12951 378 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 Q1RN00 199 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 ZNF493Q6ZR52 646 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 PRSS33Q8NF86 280 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 DLX4Q92988 240 aaPredicted RBP5.22□□□□□ -1.57
LMO3-235ENST00000616247 BEX4Q9NWD9 120 aaPredicted RBP5.22□□□□□ -1.57
LMO3-235ENST00000616247 TMEM14CQ9P0S9 112 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 HIGD1BQ9P298 99 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 PCSK5Q92824 1860 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 IGKV3-7A0A075B6H7 116 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 TRBV20-1A0A075B6N2 111 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 C17orf100A8MU93 164 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 LAGE3Q14657 143 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 KLHL30-AS1Q8NEE0 82 aa5.22□□□□□ -1.57
LMO3-235ENST00000616247 TM2D2Q9BX73 214 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms