RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 IGHV1-69P01742 117 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 FAM159AQ6UWV7 190 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 OR11H1Q8NG94 326 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 OR11H2Q8NH07 326 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 AGPAT4-IT1Q9H0P7 198 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 MRPS16Q9Y3D3 137 aaKnown RBP4.99□□□□□ -1.61
SNX13-213ENST00000611725 TRBV7-1A0A0A6YYK4 115 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 A1L4Q6 167 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 ODF3BA8MYP8 253 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 H3BVH4 76 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 FCN3O75636 299 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 ATP5LO75964 103 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 COX6B1P14854 86 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 KLF5Q13887 457 aaPredicted RBP4.99□□□□□ -1.61
SNX13-213ENST00000611725 FAM120AOSQ5T036 256 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 RUSC1-AS1Q66K80 236 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 VGLL1Q99990 258 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 TRAV21A0A0B4J279 112 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 PRSS57Q6UWY2 283 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 Q8N9W7 124 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 RHPN1-AS1Q9BWJ2 59 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 SCGB1D4Q6XE38 83 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 RNF182Q8N6D2 247 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 VPS25Q9BRG1 176 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 LY6LH3BQJ8 138 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 NDUFS8O00217 210 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 OVOL1O14753 267 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 IGHV4-39P01824 125 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 GCSHP23434 173 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 IFI27P40305 119 aaPredicted RBP4.99□□□□□ -1.61
SNX13-213ENST00000611725 FXYD7P58549 80 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 C8orf49Q96NF6 230 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 MS4A6AQ9H2W1 248 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 YLPM1P49750 1951 aaKnown RBP4.98□□□□□ -1.61
SNX13-213ENST00000611725 C7orf71A4D174 169 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 HTN1P15515 57 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 DYNAPQ8N1N2 210 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 ZNF48Q96MX3 618 aaPredicted RBP4.98□□□□□ -1.61
SNX13-213ENST00000611725 FOXC2Q99958 501 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 BUB3O43684 328 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 HLA-DMBP28068 263 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 LMO4P61968 165 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 ERCC8Q13216 396 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 SIRPDQ9H106 197 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 IGHV1-24A0A0C4DH33 117 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 SMKR1H3BMG3 65 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 RNF151Q2KHN1 245 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 LDLRAD2Q5SZI1 272 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 USMG5Q96IX5 58 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 TRAV8-6A0A0B4J262 113 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 IGHV4-61A0A0C4DH41 118 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 K7ERU9 68 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 MSMBP08118 114 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 LEPP41159 167 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 SNRPD3P62318 126 aaKnown RBP4.98□□□□□ -1.61
SNX13-213ENST00000611725 DAZ1Q9NQZ3 744 aaKnown RBP4.98□□□□□ -1.61
SNX13-213ENST00000611725 HOXB4P17483 251 aaPredicted RBP4.98□□□□□ -1.61
SNX13-213ENST00000611725 CTRLP40313 264 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 TMEM97Q5BJF2 176 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 FAM74A4Q5TZK3 123 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 ARL6IP6Q8N6S5 226 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 ZNF747Q9BV97 191 aa4.98□□□□□ -1.61
SNX13-213ENST00000611725 GAGE10A6NGK3 116 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 MAJINQ3KP22 176 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 GTF2H5Q6ZYL4 71 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 ITLN2Q8WWU7 325 aaPredicted RBP4.97□□□□□ -1.61
SNX13-213ENST00000611725 WI2-2373I1.2A0A1W2PRP0 233 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 NPYP01303 97 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 IGKV3-20P01619 116 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 EGR2P11161 476 aaPredicted RBP4.97□□□□□ -1.61
SNX13-213ENST00000611725 EBI3Q14213 229 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 CDSNQ15517 529 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 GDF5OSQ5U4N7 250 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 KIR2DL4Q99706 377 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 FAM223BA6NKX1 122 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 PPP1R17O96001 155 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 C8orf86Q6ZUL3 223 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 FAM223AQ8IWN6 122 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 STPG4Q8N801 248 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 GLMPQ8WWB7 406 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 ARHGAP21Q5T5U3 1957 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 C2orf70A6NJV1 201 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 LINC00477Q96M19 166 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
SNX13-213ENST00000611725 TNFRSF6BO95407 300 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 EVI2AP22794 236 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 SAMD13Q5VXD3 122 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 PEF1Q9UBV8 284 aaKnown RBP4.97□□□□□ -1.61
SNX13-213ENST00000611725 TRBV6-1A0A0K0K1D8 114 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 TMEM160Q9NX00 188 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 SIGLEC8Q9NYZ4 499 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 MSRB1Q9NZV6 116 aa4.97□□□□□ -1.61
SNX13-213ENST00000611725 MRPL51Q4U2R6 128 aaKnown RBP4.96□□□□□ -1.61
SNX13-213ENST00000611725 LINC00173Q6ZV60 143 aa4.96□□□□□ -1.61
SNX13-213ENST00000611725 OR4X2Q8NGF9 303 aa4.96□□□□□ -1.61
SNX13-213ENST00000611725 VCANP13611 3396 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms