RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 KLK13Q9UKR3 277 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 ZDBF2Q9HCK1 2354 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 IGHV1OR15-9A0A0B4J2B8 117 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 COX7A2LO14548 114 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 RBMY1FQ15415 496 aaKnown RBP4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 TMEM243Q9BU79 118 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 TTTY10Q9BZA0 68 aa4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 ZNF706Q9Y5V0 76 aaPredicted RBP4.41□□□□□ -1.7
COL4A3BP-207ENST00000604926 CEBPZOSA8MTT3 80 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 KLLNB2CW77 178 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 Q6ZSV7 163 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 TMEM252Q8N6L7 170 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 CACNA1DQ01668 2161 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 CPSF4LA6NMK7 179 aaKnown RBP4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 FHL2Q14192 279 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 FAM57BQ71RH2 274 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 PLXNA2O75051 1894 aa4.4□□□□□ -1.7
COL4A3BP-207ENST00000604926 TRIAP1O43715 76 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 C6orf99Q4VX62 202 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 ZNF678Q5SXM1 525 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 Q6ZPA2 131 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 ZNF329Q86UD4 541 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 FAM30AQ9NZY2 134 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 ADAMTS20P59510 1910 aa4.4□□□□□ -1.71
COL4A3BP-207ENST00000604926 FSTL3O95633 263 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 GCHFRP30047 84 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 SYNJ2BPP57105 145 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 RIGQ13278 110 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 ZFP2Q6ZN57 461 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 RNF185Q96GF1 192 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 SPAG17Q6Q759 2223 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 LOC389332A0A1B0GUA5 103 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 C10orf142B7Z368 130 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 CCKP06307 115 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 SSBP1Q04837 148 aaKnown RBP4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 ZNF627Q7L945 461 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 GVQW1Q8N7I0 195 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 MORN4Q8NDC4 146 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 MPLKIPQ8TAP9 179 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 VSIG2Q96IQ7 327 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 CCL13Q99616 98 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 MAP6D1Q9H9H5 199 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 FER1L5A0AVI2 2057 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 J3QLW9 94 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 HIST1H4AP62805 103 aaKnown RBP4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 MRPS36P82909 103 aaKnown RBP4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 LIME1Q9H400 295 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 UNC80Q8N2C7 3258 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 PTPRBP23467 1997 aa4.39□□□□□ -1.71
COL4A3BP-207ENST00000604926 TRAV1-2A0A0B4J238 106 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 TCRBV4S1A1TA0A5B7 111 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 PROK2Q9HC23 129 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 TIMM8BQ9Y5J9 83 aaPredicted RBP4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 H3BSH0 61 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 K7EMI3 77 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 LINC00271P0C7V0 271 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 MGST1P10620 155 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 GFRALQ6UXV0 394 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 FOXL2NBQ6ZUU3 175 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 PHF5AQ7RTV0 110 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 FAM223AQ8IWN6 122 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 Q8N8P6 123 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 FLNBO75369 2602 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 FASNP49327 2511 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 ARHGAP21Q5T5U3 1957 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 EML6Q6ZMW3 1958 aa4.38□□□□□ -1.71
COL4A3BP-207ENST00000604926 LTAP01374 205 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 FRMD6-AS1P0C7T7 363 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 C5orf38Q86SI9 138 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 C15orf62A8K5M9 175 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 BUB1B-PAK6H3BSN5 160 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 LEPROTL1O95214 131 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 FOLR3P41439 243 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 C12orf73Q69YU5 71 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 LINC00528Q8N1L1 170 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 ZNF645Q8N7E2 425 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 SLC50A1Q9BRV3 221 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 SLC25A15Q9Y619 301 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 MYO7AQ13402 2215 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 TANC2Q9HCD6 1990 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 A0A0G2JRQ6 117 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 HBDP02042 147 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 IL4P05112 153 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 LRRK1Q38SD2 2015 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 LYPD5Q6UWN5 251 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 GPHB5Q86YW7 130 aa4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 DIDO1Q9BTC0 2240 aaKnown RBP4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 RAI1Q7Z5J4 1906 aaPredicted RBP4.37□□□□□ -1.71
COL4A3BP-207ENST00000604926 IGKV1-9A0A0C4DH69 117 aa4.36□□□□□ -1.71
COL4A3BP-207ENST00000604926 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
COL4A3BP-207ENST00000604926 SLC25A20O43772 301 aa4.36□□□□□ -1.71
COL4A3BP-207ENST00000604926 IGLV3-25P01717 112 aa4.36□□□□□ -1.71
COL4A3BP-207ENST00000604926 RPS18P62269 152 aaKnown RBP4.36□□□□□ -1.71
COL4A3BP-207ENST00000604926 ZNF876PQ49A33 203 aa4.36□□□□□ -1.71
COL4A3BP-207ENST00000604926 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms