RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TMEM213A2RRL7 107 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 C5orf52A6NGY3 159 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 UBE2CO00762 179 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
HIF3A-218ENST00000600383 ZNF705DP0CH99 300 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-218ENST00000600383 ZNF705BP0CI00 300 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-218ENST00000600383 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-218ENST00000600383 NDUFA6P56556 154 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
HIF3A-218ENST00000600383 TCF24Q7RTU0 167 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 WFDC3Q8IUB2 231 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 CRIP1P50238 77 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 SLURP1P55000 103 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 SAPCD1Q5SSQ6 148 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 ZNF738Q8NE65 137 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 C20orf173Q96LM9 149 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 NEU1Q99519 415 aa11.51□□□□□ -0.57
HIF3A-218ENST00000600383 TRAV9-1A0A075B6T8 112 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 HIGD1CA8MV81 97 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 CBLN1P23435 193 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 OR2D3Q8NGH3 330 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 DPF1Q92782 380 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 GPR61Q9BZJ8 451 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 A0A1W2PRX2 142 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 A8MWL6 223 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 INAFM1C9JVW0 142 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 GZMBP10144 247 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 HILS1P60008 231 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 RAB4BP61018 213 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
HIF3A-218ENST00000600383 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 LINC01006Q8NI28 216 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 NAT8BQ9UHF3 227 aa11.5□□□□□ -0.57
HIF3A-218ENST00000600383 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
HIF3A-218ENST00000600383 PHOX2AO14813 284 aa11.49□□□□□ -0.57
HIF3A-218ENST00000600383 TFPI2P48307 235 aa11.49□□□□□ -0.57
HIF3A-218ENST00000600383 DEFB1P60022 68 aa11.49□□□□□ -0.57
HIF3A-218ENST00000600383 ACTL10Q5JWF8 245 aa11.49□□□□□ -0.57
HIF3A-218ENST00000600383 C4orf3Q8WVX3 66 aa11.49□□□□□ -0.57
HIF3A-218ENST00000600383 FBLL1A6NHQ2 334 aaKnown RBP11.48□□□□□ -0.57
HIF3A-218ENST00000600383 LINC01619G3V211 115 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 BMI1P35226 326 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 TMEM78Q5T7P6 136 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 NDFIP1Q9BT67 221 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 RBAKDNA6NC62 111 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 LGALS9O00182 355 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 SOCS3O14543 225 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 KLF5Q13887 457 aaPredicted RBP11.48□□□□□ -0.57
HIF3A-218ENST00000600383 CLEC5AQ9NY25 188 aa11.48□□□□□ -0.57
HIF3A-218ENST00000600383 SNURFLB1AK76 121 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 CD28P10747 220 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 REC114Q7Z4M0 266 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 GTSF1Q8WW33 167 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
HIF3A-218ENST00000600383 PGLYRP4Q96LB8 373 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 TMSB15BA0A087X1C1 80 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 A8MWP6 167 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 SH2D1AO60880 128 aa11.47□□□□□ -0.57
HIF3A-218ENST00000600383 ZNF80P51504 273 aaPredicted RBP11.47□□□□□ -0.57
HIF3A-218ENST00000600383 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
HIF3A-218ENST00000600383 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
HIF3A-218ENST00000600383 CAMPP49913 170 aa11.46□□□□□ -0.57
HIF3A-218ENST00000600383 CT83Q5H943 113 aa11.46□□□□□ -0.57
HIF3A-218ENST00000600383 F6UB75 175 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 ZNF138P52744 262 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 MRPL18Q9H0U6 180 aaKnown RBP11.45□□□□□ -0.58
HIF3A-218ENST00000600383 MS4A6AQ9H2W1 248 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 GSN-AS1Q9NRJ2 163 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-218ENST00000600383 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-218ENST00000600383 GNB1LQ9BYB4 327 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
HIF3A-218ENST00000600383 WNK1Q9H4A3 2382 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 TMEM189A5PLL7 270 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 J3KRW8 73 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 M0QZ24 198 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 ID1P41134 155 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 SSTP61278 116 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 DCANP1Q8TF63 244 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 SETXQ7Z333 2677 aaKnown RBP11.44□□□□□ -0.58
HIF3A-218ENST00000600383 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-218ENST00000600383 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 PRR31Q5SQ13 230 aa11.44□□□□□ -0.58
HIF3A-218ENST00000600383 RBPMS2Q6ZRY4 209 aaKnown RBP11.44□□□□□ -0.58
HIF3A-218ENST00000600383 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-218ENST00000600383 GFRA4Q9GZZ7 299 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms