RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 ARL2-SNX15V9GYD0 113 aa10.48□□□□□ -0.73
VRK3-213ENST00000597215 COL7A1Q02388 2944 aa10.47□□□□□ -0.73
VRK3-213ENST00000597215 SERTM2A0A1B0GWG4 89 aa10.47□□□□□ -0.73
VRK3-213ENST00000597215 TSPOP30536 169 aa10.47□□□□□ -0.73
VRK3-213ENST00000597215 LEPP41159 167 aa10.47□□□□□ -0.73
VRK3-213ENST00000597215 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
VRK3-213ENST00000597215 AGPAT4-IT1Q9H0P7 198 aa10.47□□□□□ -0.73
VRK3-213ENST00000597215 CT45A10P0DMU9 189 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 CDKN1BP46527 198 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 GNG5P63218 68 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 GOLT1AQ6ZVE7 132 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 IGF2BP2-AS1Q96M15 143 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 VGLL1Q99990 258 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 EPDR1Q9UM22 224 aa10.46□□□□□ -0.73
VRK3-213ENST00000597215 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.74
VRK3-213ENST00000597215 K7EQM0 130 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 PAGE4O60829 102 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 INSP01308 110 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 IFNA7P01567 189 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 TCRAP04437 139 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 ZNF138P52744 262 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 BLOC1S1P78537 153 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 CST9LP1Q5W188 147 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 OR11H2Q8NH07 326 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 RARRES2Q99969 163 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 MANBALQ9NQG1 85 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 ZNF492Q9P255 531 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
VRK3-213ENST00000597215 CRXO43186 299 aaPredicted RBP10.44□□□□□ -0.74
VRK3-213ENST00000597215 CYB561D1Q8N8Q1 229 aa10.44□□□□□ -0.74
VRK3-213ENST00000597215 TCEAL7Q9BRU2 100 aa10.44□□□□□ -0.74
VRK3-213ENST00000597215 ATG101Q9BSB4 218 aa10.44□□□□□ -0.74
VRK3-213ENST00000597215 GNG13Q9P2W3 67 aa10.44□□□□□ -0.74
VRK3-213ENST00000597215 TRAV12-2A0A075B6T6 113 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 TRBV7-9A0A0J9YWB2 115 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 IFNA1P01562 189 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 NMBP08949 121 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 CRISP2P16562 243 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 CCL20P78556 96 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 Q8TAT8 98 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 HIST1H2BAQ96A08 127 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 FAM19A4Q96LR4 140 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
VRK3-213ENST00000597215 TENM3Q9P273 2699 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
VRK3-213ENST00000597215 F6UZH7 168 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 J3KRW8 73 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 PEX7O00628 323 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 ATP5G3P48201 142 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 TEX261Q6UWH6 196 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
VRK3-213ENST00000597215 CCDC28AQ8IWP9 274 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 C1orf158Q8N1D5 194 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 TMEM256Q8N2U0 113 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 C20orf144Q9BQM9 153 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 TMEM208Q9BTX3 173 aa10.42□□□□□ -0.74
VRK3-213ENST00000597215 TRAV8-1A0A0A6YYK1 113 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 C7orf71A4D174 169 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 KLLNB2CW77 178 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 MIFP14174 115 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 PMS2P11Q13670 270 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 GFI1BQ5VTD9 330 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 ZFAND2AQ8N6M9 145 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 NEU1Q99519 415 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 NDFIP1Q9BT67 221 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 X6R8D5 127 aa10.41□□□□□ -0.74
VRK3-213ENST00000597215 SMIM9A6NGZ8 99 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 C11orf94C9JXX5 98 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 GPX1P07203 203 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 TAGLN2P37802 199 aaKnown RBP10.4□□□□□ -0.74
VRK3-213ENST00000597215 ZNF680Q8NEM1 530 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 TXNDC17Q9BRA2 123 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 NIPSNAP3BQ9BS92 247 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 PSG8Q9UQ74 426 aa10.4□□□□□ -0.74
VRK3-213ENST00000597215 TRAV12-3A0A0B4J271 114 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 H7BYZ3 331 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 RBMY1A1P0DJD3 496 aaKnown RBP10.39□□□□□ -0.75
VRK3-213ENST00000597215 RBMY1CP0DJD4 496 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 BCL2P10415 239 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 FLI1Q01543 452 aaPredicted RBP10.39□□□□□ -0.75
VRK3-213ENST00000597215 BTN1A1Q13410 526 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 RBMY1FQ15415 496 aaKnown RBP10.39□□□□□ -0.75
VRK3-213ENST00000597215 Q8NAQ8 132 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 LINC01587Q99440 93 aa10.39□□□□□ -0.75
VRK3-213ENST00000597215 C11orf68Q9H3H3 251 aaKnown RBP10.39□□□□□ -0.75
VRK3-213ENST00000597215 TRAV34A0A0B4J273 112 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 A0A0J9YWU9 116 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 SCO2A0A1W2PP80 73 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 IGLV2-11P01706 119 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 RNASE4P34096 147 aaKnown RBP10.38□□□□□ -0.75
VRK3-213ENST00000597215 AKR1C3P42330 323 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 RRN3P1Q2M238 152 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 PRR9Q5T870 116 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 PRNTQ86SH4 94 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms