RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 IL36BQ9NZH7 164 aa17.35■□□□□ 0.37
SPTBN4-210ENST00000596900 TRBV24-1A0A075B6N3 115 aa17.34■□□□□ 0.37
SPTBN4-210ENST00000596900 GATCO43716 136 aaKnown RBP17.34■□□□□ 0.37
SPTBN4-210ENST00000596900 SETXQ7Z333 2677 aaKnown RBP17.34■□□□□ 0.37
SPTBN4-210ENST00000596900 PRR25Q96S07 402 aa17.34■□□□□ 0.37
SPTBN4-210ENST00000596900 TMA7Q9Y2S6 64 aaKnown RBP17.34■□□□□ 0.37
SPTBN4-210ENST00000596900 SELENOKQ9Y6D0 94 aa17.34■□□□□ 0.37
SPTBN4-210ENST00000596900 SNRPD3P62318 126 aaKnown RBP17.33■□□□□ 0.37
SPTBN4-210ENST00000596900 ADAMTSL5Q6ZMM2 481 aa17.33■□□□□ 0.37
SPTBN4-210ENST00000596900 NUDT10Q8NFP7 164 aa17.33■□□□□ 0.37
SPTBN4-210ENST00000596900 NUDT11Q96G61 164 aa17.33■□□□□ 0.37
SPTBN4-210ENST00000596900 C20orf173Q96LM9 149 aa17.33■□□□□ 0.37
SPTBN4-210ENST00000596900 CSN3P07498 182 aa17.33■□□□□ 0.36
SPTBN4-210ENST00000596900 RAB5AP20339 215 aa17.33■□□□□ 0.36
SPTBN4-210ENST00000596900 C9orf47Q6ZRZ4 202 aa17.33■□□□□ 0.36
SPTBN4-210ENST00000596900 WFDC3Q8IUB2 231 aa17.33■□□□□ 0.36
SPTBN4-210ENST00000596900 OR10J6PQ8NGY7 276 aa17.33■□□□□ 0.36
SPTBN4-210ENST00000596900 TGIF2-C20orf24A0A0A6YYL0 155 aa17.32■□□□□ 0.36
SPTBN4-210ENST00000596900 A0A1W2PPQ1 181 aa17.32■□□□□ 0.36
SPTBN4-210ENST00000596900 P01737 135 aa17.32■□□□□ 0.36
SPTBN4-210ENST00000596900 COX8CQ7Z4L0 72 aa17.32■□□□□ 0.36
SPTBN4-210ENST00000596900 ZC2HC1AQ96GY0 325 aa17.32■□□□□ 0.36
SPTBN4-210ENST00000596900 NSUN5P1Q3KNT7 163 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 RBPMS2Q6ZRY4 209 aaKnown RBP17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 Q8TAT8 98 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 FAM210BQ96KR6 192 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 TRAV9-1A0A075B6T8 112 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 C19orf71A6NCJ1 209 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 CYSRT1A8MQ03 144 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 K7EQG2 157 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 CXCL1P09341 107 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 TFPI2P48307 235 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 ZNF138P52744 262 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 ERCC8Q13216 396 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 PPP1R14DQ9NXH3 145 aa17.31■□□□□ 0.36
SPTBN4-210ENST00000596900 C2CD3Q4AC94 2353 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 ADARB2-AS1A8MUL3 147 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 OR4B1Q8NGF8 309 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 C8orf49Q96NF6 230 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 PYGO2Q9BRQ0 406 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 AGPAT4-IT1Q9H0P7 198 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 SIGLEC8Q9NYZ4 499 aa17.3■□□□□ 0.36
SPTBN4-210ENST00000596900 SETD2Q9BYW2 2564 aaPredicted RBP17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 TRAV2A0A0B4J234 112 aa17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 FAM3BP58499 235 aaPredicted RBP17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 SMUG1Q53HV7 270 aa17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 CT83Q5H943 113 aa17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 LINC00477Q96M19 166 aa17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 RPP21Q9H633 154 aaKnown RBP17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 LENEPQ9Y5L5 61 aa17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 RPL19P84098 196 aaKnown RBP17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 LINC00322Q6ZN03 302 aaPredicted RBP17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 ASCL2Q99929 193 aa17.29■□□□□ 0.36
SPTBN4-210ENST00000596900 KRTAP10-3P60369 221 aa17.28■□□□□ 0.36
SPTBN4-210ENST00000596900 NPIPB6E9PJ23 425 aa17.27■□□□□ 0.36
SPTBN4-210ENST00000596900 FAM162BQ5T6X4 162 aa17.27■□□□□ 0.36
SPTBN4-210ENST00000596900 OR8A1Q8NGG7 326 aa17.27■□□□□ 0.36
SPTBN4-210ENST00000596900 ZNF688P0C7X2 276 aa17.27■□□□□ 0.35
SPTBN4-210ENST00000596900 RPS10P46783 165 aaKnown RBP17.27■□□□□ 0.35
SPTBN4-210ENST00000596900 DEFB114Q30KQ6 69 aa17.27■□□□□ 0.35
SPTBN4-210ENST00000596900 GPR61Q9BZJ8 451 aa17.27■□□□□ 0.35
SPTBN4-210ENST00000596900 SMIM27A0A1W2PRY6 76 aa17.26■□□□□ 0.35
SPTBN4-210ENST00000596900 A8MWL6 223 aa17.26■□□□□ 0.35
SPTBN4-210ENST00000596900 HIST1H1AQ02539 215 aaPredicted RBP17.26■□□□□ 0.35
SPTBN4-210ENST00000596900 PSMG4Q5JS54 123 aa17.26■□□□□ 0.35
SPTBN4-210ENST00000596900 TMEM61Q8N0U2 210 aa17.26■□□□□ 0.35
SPTBN4-210ENST00000596900 TSKUQ8WUA8 353 aa17.26■□□□□ 0.35
SPTBN4-210ENST00000596900 TRAV25A0A0B4J276 109 aa17.25■□□□□ 0.35
SPTBN4-210ENST00000596900 CA1P00915 261 aaPredicted RBP17.24■□□□□ 0.35
SPTBN4-210ENST00000596900 PF4P02776 101 aa17.24■□□□□ 0.35
SPTBN4-210ENST00000596900 CRIP1P50238 77 aa17.24■□□□□ 0.35
SPTBN4-210ENST00000596900 OR2D3Q8NGH3 330 aa17.24■□□□□ 0.35
SPTBN4-210ENST00000596900 TYMSP04818 313 aa17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 ZNF705DP0CH99 300 aaPredicted RBP17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 ZNF705BP0CI00 300 aaPredicted RBP17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 SPAG8Q99932 426 aaPredicted RBP17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 GFRA4Q9GZZ7 299 aa17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 SRD5A3Q9H8P0 318 aa17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 NAT8BQ9UHF3 227 aa17.23■□□□□ 0.35
SPTBN4-210ENST00000596900 TRBV7-9A0A0J9YWB2 115 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 C1orf196B1AJZ1 125 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 SH2D1AO60880 128 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 CD300EQ496F6 205 aaPredicted RBP17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 FAM231BA6NCW3 169 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 OR4C46A6NHA9 309 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 FABP5P3A8MUU1 101 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 F6UB75 175 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 TCL1AP56279 114 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 EBLN2Q6P2I7 272 aa17.22■□□□□ 0.35
SPTBN4-210ENST00000596900 XKRY2A2RUG3 117 aa17.21■□□□□ 0.35
SPTBN4-210ENST00000596900 WNK1Q9H4A3 2382 aa17.2■□□□□ 0.34
SPTBN4-210ENST00000596900 NEU1Q99519 415 aa17.2■□□□□ 0.34
SPTBN4-210ENST00000596900 IZUMO1RA6ND01 250 aa17.2■□□□□ 0.34
SPTBN4-210ENST00000596900 SAP30O75446 220 aa17.2■□□□□ 0.34
SPTBN4-210ENST00000596900 DEFB1P60022 68 aa17.2■□□□□ 0.34
SPTBN4-210ENST00000596900 RAB5BP61020 215 aa17.2■□□□□ 0.34
SPTBN4-210ENST00000596900 HIGD1CA8MV81 97 aa17.19■□□□□ 0.34
SPTBN4-210ENST00000596900 ZNF80P51504 273 aaPredicted RBP17.19■□□□□ 0.34
SPTBN4-210ENST00000596900 TMEM189A5PLL7 270 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms