RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TRAV12-3A0A0B4J271 114 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 ASIPP42127 132 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
RETREG3-208ENST00000589797 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
RETREG3-208ENST00000589797 I3L2K1 104 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 C11orf52Q96A22 123 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 GCSHP23434 173 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 C18orf32Q8TCD1 76 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 FOXC2Q99958 501 aa11.46□□□□□ -0.57
RETREG3-208ENST00000589797 LEPP41159 167 aa11.46□□□□□ -0.58
RETREG3-208ENST00000589797 CACNG7P62955 275 aa11.46□□□□□ -0.58
RETREG3-208ENST00000589797 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
RETREG3-208ENST00000589797 IGHV3-73A0A0B4J1V6 119 aa11.45□□□□□ -0.58
RETREG3-208ENST00000589797 EMP1P54849 157 aa11.45□□□□□ -0.58
RETREG3-208ENST00000589797 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
RETREG3-208ENST00000589797 M0QZK8 103 aa11.45□□□□□ -0.58
RETREG3-208ENST00000589797 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-208ENST00000589797 YPEL3P61236 119 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-208ENST00000589797 C14orf178Q8N769 122 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-208ENST00000589797 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-208ENST00000589797 NDUFAF3Q9BU61 184 aa11.45□□□□□ -0.58
RETREG3-208ENST00000589797 Q6ZWC4 215 aa11.45□□□□□ -0.58
RETREG3-208ENST00000589797 IGKV1D-37A0A075B6S9 117 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 Q5PR19 223 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 LDLRAD2Q5SZI1 272 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 Q96MF0 132 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 Q8N9W7 124 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 IGKV3OR2-268A0A0C4DH90 116 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 TMEM97Q5BJF2 176 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 OR10J3Q5JRS4 329 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
RETREG3-208ENST00000589797 ASPMQ8IZT6 3477 aa11.43□□□□□ -0.58
RETREG3-208ENST00000589797 CTSGP08311 255 aa11.43□□□□□ -0.58
RETREG3-208ENST00000589797 H3BRN7 92 aa11.43□□□□□ -0.58
RETREG3-208ENST00000589797 NDUFA3O95167 84 aa11.43□□□□□ -0.58
RETREG3-208ENST00000589797 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 TYMSP04818 313 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 FBXL19-AS1Q494R0 122 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 C1orf122Q6ZSJ8 110 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 PRR25Q96S07 402 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 VPS25Q9BRG1 176 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 TDRG1Q3Y452 100 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 C8orf31Q8N9H6 132 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 Q1RN00 199 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 Q6AWC8 147 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 C8orf86Q6ZUL3 223 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 LINC01356Q8N9X3 169 aa11.42□□□□□ -0.58
RETREG3-208ENST00000589797 A0A1W2PPR1 153 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 MIEN1Q9BRT3 115 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 GP9P14770 177 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 DEFB136Q30KP8 78 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 KALRNO60229 2985 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 A0A087WWL8 130 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 TRAV26-2A0A0B4J265 109 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 HIST2H2BCQ6DN03 193 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 HIST2H2BDQ6DRA6 164 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 FANCD2OSQ96PS1 177 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 POLR3KQ9Y2Y1 108 aaPredicted RBP11.41□□□□□ -0.58
RETREG3-208ENST00000589797 TRAV21A0A0B4J279 112 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 MAJINQ3KP22 176 aa11.41□□□□□ -0.58
RETREG3-208ENST00000589797 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
RETREG3-208ENST00000589797 H7C2G1 150 aa11.4□□□□□ -0.58
RETREG3-208ENST00000589797 PRSS57Q6UWY2 283 aa11.4□□□□□ -0.58
RETREG3-208ENST00000589797 LINC01587Q99440 93 aa11.4□□□□□ -0.58
RETREG3-208ENST00000589797 SRSF8Q9BRL6 282 aaKnown RBP11.4□□□□□ -0.58
RETREG3-208ENST00000589797 PEF1Q9UBV8 284 aaKnown RBP11.4□□□□□ -0.58
RETREG3-208ENST00000589797 SCGB1C2P0DMR2 95 aa11.4□□□□□ -0.58
RETREG3-208ENST00000589797 NSUN5P1Q3KNT7 163 aa11.4□□□□□ -0.58
RETREG3-208ENST00000589797 SCGB3A1Q96QR1 104 aa11.4□□□□□ -0.58
RETREG3-208ENST00000589797 PRAC2D3DTV9 90 aa11.4□□□□□ -0.59
RETREG3-208ENST00000589797 LMO4P61968 165 aa11.4□□□□□ -0.59
RETREG3-208ENST00000589797 LINC00574Q9H8X3 128 aa11.4□□□□□ -0.59
RETREG3-208ENST00000589797 MSRB1Q9NZV6 116 aa11.4□□□□□ -0.59
RETREG3-208ENST00000589797 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 A8MWP6 167 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 DTX2Q86UW9 622 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 LYPD1Q8N2G4 141 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 LAMTOR2Q9Y2Q5 125 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 SMIM27A0A1W2PRY6 76 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 LINC00322Q6ZN03 302 aaPredicted RBP11.39□□□□□ -0.59
RETREG3-208ENST00000589797 TTC9CQ8N5M4 171 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 RIPPLY3P57055 190 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 RPL24P83731 157 aaKnown RBP11.39□□□□□ -0.59
RETREG3-208ENST00000589797 TMEM170BQ5T4T1 132 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 OR1N2Q8NGR9 330 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 PYGO2Q9BRQ0 406 aa11.39□□□□□ -0.59
RETREG3-208ENST00000589797 ALKBH7Q9BT30 221 aaPredicted RBP11.39□□□□□ -0.59
RETREG3-208ENST00000589797 DAZ1Q9NQZ3 744 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms