RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 LINC00322Q6ZN03 302 aaPredicted RBP17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 GBGT1Q8N5D6 347 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 ZC2HC1AQ96GY0 325 aa17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 NSD1Q96L73 2696 aaPredicted RBP17.18■□□□□ 0.34
CAPNS1-207ENST00000589146 SMIM27A0A1W2PRY6 76 aa17.17■□□□□ 0.34
CAPNS1-207ENST00000589146 ZNF705GA8MUZ8 300 aaPredicted RBP17.17■□□□□ 0.34
CAPNS1-207ENST00000589146 CCL24O00175 119 aa17.17■□□□□ 0.34
CAPNS1-207ENST00000589146 ID1P41134 155 aa17.17■□□□□ 0.34
CAPNS1-207ENST00000589146 DUX3Q96PT4 197 aa17.17■□□□□ 0.34
CAPNS1-207ENST00000589146 CSN3P07498 182 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 FAM3BP58499 235 aaPredicted RBP17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 PRR27Q6MZM9 219 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 C11orf44Q8N8P7 122 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 ZNF738Q8NE65 137 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 OR4B1Q8NGF8 309 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 AGPAT4-IT1Q9H0P7 198 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 MS4A6AQ9H2W1 248 aa17.16■□□□□ 0.34
CAPNS1-207ENST00000589146 A0A1W2PPQ1 181 aa17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 ADARB2-AS1A8MUL3 147 aa17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 PRB4P10163 310 aaPredicted RBP17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 ERCC8Q13216 396 aa17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 DAZAP1Q96EP5 407 aaKnown RBP17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 C8orf49Q96NF6 230 aa17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 RPP21Q9H633 154 aaKnown RBP17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 SRD5A3Q9H8P0 318 aa17.15■□□□□ 0.34
CAPNS1-207ENST00000589146 TRAV2A0A0B4J234 112 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 K7EQG2 157 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 P01737 135 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 CRIP1P50238 77 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 ZNF138P52744 262 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 HIST2H2BDQ6DRA6 164 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 NDFIP1Q9BT67 221 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 LENEPQ9Y5L5 61 aa17.14■□□□□ 0.33
CAPNS1-207ENST00000589146 RPS10P46783 165 aaKnown RBP17.13■□□□□ 0.33
CAPNS1-207ENST00000589146 TSKUQ8WUA8 353 aa17.13■□□□□ 0.33
CAPNS1-207ENST00000589146 LINC00477Q96M19 166 aa17.13■□□□□ 0.33
CAPNS1-207ENST00000589146 SIGLEC8Q9NYZ4 499 aa17.13■□□□□ 0.33
CAPNS1-207ENST00000589146 A0A1W2PRX2 142 aa17.12■□□□□ 0.33
CAPNS1-207ENST00000589146 C1orf196B1AJZ1 125 aa17.12■□□□□ 0.33
CAPNS1-207ENST00000589146 CT45A10P0DMU9 189 aa17.12■□□□□ 0.33
CAPNS1-207ENST00000589146 TMEM78Q5T7P6 136 aa17.12■□□□□ 0.33
CAPNS1-207ENST00000589146 Q8TAT8 98 aa17.12■□□□□ 0.33
CAPNS1-207ENST00000589146 ASCL2Q99929 193 aa17.12■□□□□ 0.33
CAPNS1-207ENST00000589146 IGKV3-7A0A075B6H7 116 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 FAM231BA6NCW3 169 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 A8MWL6 223 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 KRTAP10-3P60369 221 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 SMUG1Q53HV7 270 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 NDUFA11Q86Y39 141 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 GPR61Q9BZJ8 451 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 GFRA4Q9GZZ7 299 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 NF1P21359 2839 aa17.11■□□□□ 0.33
CAPNS1-207ENST00000589146 CUBNO60494 3623 aa17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 TEP1Q99973 2627 aaKnown RBP17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 TRBV7-9A0A0J9YWB2 115 aa17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 PAFAH1B2P68402 229 aa17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 SRSF2Q01130 221 aaKnown RBP17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 FAM162BQ5T6X4 162 aa17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 OR8A1Q8NGG7 326 aa17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 OR10J6PQ8NGY7 276 aa17.1■□□□□ 0.33
CAPNS1-207ENST00000589146 IZUMO1RA6ND01 250 aa17.09■□□□□ 0.33
CAPNS1-207ENST00000589146 CA1P00915 261 aaPredicted RBP17.09■□□□□ 0.33
CAPNS1-207ENST00000589146 SELENOKQ9Y6D0 94 aa17.09■□□□□ 0.33
CAPNS1-207ENST00000589146 SH2D1AO60880 128 aa17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 RAB5BP61020 215 aa17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 SNRPD3P62318 126 aaKnown RBP17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 RPL19P84098 196 aaKnown RBP17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 DEFB114Q30KQ6 69 aa17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 WFDC3Q8IUB2 231 aa17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 FAM19A4Q96LR4 140 aa17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 NAT8BQ9UHF3 227 aa17.08■□□□□ 0.32
CAPNS1-207ENST00000589146 TRAV25A0A0B4J276 109 aa17.07■□□□□ 0.32
CAPNS1-207ENST00000589146 PHOX2AO14813 284 aa17.07■□□□□ 0.32
CAPNS1-207ENST00000589146 OR2D3Q8NGH3 330 aa17.07■□□□□ 0.32
CAPNS1-207ENST00000589146 ZNF80P51504 273 aaPredicted RBP17.06■□□□□ 0.32
CAPNS1-207ENST00000589146 FOXA3P55318 350 aaPredicted RBP17.06■□□□□ 0.32
CAPNS1-207ENST00000589146 DYNLRB2Q8TF09 96 aa17.06■□□□□ 0.32
CAPNS1-207ENST00000589146 NEU1Q99519 415 aa17.06■□□□□ 0.32
CAPNS1-207ENST00000589146 F8P00451 2351 aa17.05■□□□□ 0.32
CAPNS1-207ENST00000589146 FABP5P3A8MUU1 101 aa17.05■□□□□ 0.32
CAPNS1-207ENST00000589146 TCL1AP56279 114 aa17.05■□□□□ 0.32
CAPNS1-207ENST00000589146 COX19Q49B96 90 aa17.05■□□□□ 0.32
CAPNS1-207ENST00000589146 NUP35Q8NFH5 326 aa17.05■□□□□ 0.32
CAPNS1-207ENST00000589146 TRGC2P03986 189 aa17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 TFPI2P48307 235 aa17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 HIST1H1AQ02539 215 aaPredicted RBP17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 RASL11AQ6T310 242 aa17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 RBPMS2Q6ZRY4 209 aaKnown RBP17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 APRG1Q8IVJ8 170 aa17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 TMEM61Q8N0U2 210 aa17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 GTSF1Q8WW33 167 aa17.04■□□□□ 0.32
CAPNS1-207ENST00000589146 HIGD1CA8MV81 97 aa17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 ZNF688P0C7X2 276 aa17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 ZNF705DP0CH99 300 aaPredicted RBP17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 ZNF705BP0CI00 300 aaPredicted RBP17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 CRISP2P16562 243 aa17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 RPS20P60866 119 aaKnown RBP17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 NSUN5P1Q3KNT7 163 aa17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 ACTL10Q5JWF8 245 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms