RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
SMAD4-206ENST00000588860 C8orf86Q6ZUL3 223 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 TMEM86BQ8N661 226 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 ARL6IP6Q8N6S5 226 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 TSKUQ8WUA8 353 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
SMAD4-206ENST00000588860 TLN2Q9Y4G6 2542 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 IGHV7-4-1A0A0J9YVY3 117 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 A0A1W2PS18 150 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 DNAJC9-AS1A6NH13 148 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 FBLL1A6NHQ2 334 aaKnown RBP6.69□□□□□ -1.34
SMAD4-206ENST00000588860 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 LGALS1P09382 135 aaKnown RBP6.69□□□□□ -1.34
SMAD4-206ENST00000588860 CT45A10P0DMU9 189 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 RAB4BP61018 213 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 FAM106AQ4KMX7 169 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 SMUG1Q53HV7 270 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 TM4SF20Q53R12 229 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 CT83Q5H943 113 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 WDR73Q6P4I2 378 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 TCF24Q7RTU0 167 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 Q8N2B8 174 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 OR4B1Q8NGF8 309 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 C16orf92Q96LL3 132 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 VGLL1Q99990 258 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 MRPL18Q9H0U6 180 aaKnown RBP6.69□□□□□ -1.34
SMAD4-206ENST00000588860 NAT8BQ9UHF3 227 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
SMAD4-206ENST00000588860 XKRY2A2RUG3 117 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 A8MWL6 223 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 SNURFLB1AK76 121 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 FRMD6-AS1P0C7T7 363 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 HOXA5P20719 270 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 ERCC8Q13216 396 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 COX19Q49B96 90 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 SAPCD1Q5SSQ6 148 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 TMEM136Q6ZRR5 245 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 GPHB5Q86YW7 130 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 NUP35Q8NFH5 326 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 OR2D3Q8NGH3 330 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 Q8TAT8 98 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 MRPL53Q96EL3 112 aaKnown RBP6.68□□□□□ -1.34
SMAD4-206ENST00000588860 NEU1Q99519 415 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 NDFIP1Q9BT67 221 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 DAZ1Q9NQZ3 744 aaKnown RBP6.68□□□□□ -1.34
SMAD4-206ENST00000588860 UFC1Q9Y3C8 167 aa6.68□□□□□ -1.34
SMAD4-206ENST00000588860 RBAKDNA6NC62 111 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 HIGD1CA8MV81 97 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 NPIPB6E9PJ23 425 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 K7EMT4 169 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 SH2D1AO60880 128 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 MT-ND6P03923 174 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 GZMBP10144 247 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 RPL11P62913 178 aaKnown RBP6.67□□□□□ -1.34
SMAD4-206ENST00000588860 FAM162BQ5T6X4 162 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 GFI1BQ5VTD9 330 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 ZNF738Q8NE65 137 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 MYOZ3Q8TDC0 251 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 RHPN1-AS1Q9BWJ2 59 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 CLEC5AQ9NY25 188 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 SMPXQ9UHP9 88 aa6.67□□□□□ -1.34
SMAD4-206ENST00000588860 SONP18583 2426 aaKnown RBP6.67□□□□□ -1.34
SMAD4-206ENST00000588860 IGHV4OR15-8A0A075B7B6 117 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 A0A087WW49 117 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 EDN2P20800 178 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 BMI1P35226 326 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 CDX1P47902 265 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-206ENST00000588860 CRIP1P50238 77 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 PDZD11Q5EBL8 140 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 RBPMS2Q6ZRY4 209 aaKnown RBP6.66□□□□□ -1.34
SMAD4-206ENST00000588860 Q6ZSV7 163 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 HIST3H2BBQ8N257 126 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 KLHDC1Q8N7A1 406 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 RNF152Q8N8N0 203 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 WIPF2Q8TF74 440 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-206ENST00000588860 GTSF1Q8WW33 167 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 UBE2E2Q96LR5 201 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 PRR25Q96S07 402 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 GPR61Q9BZJ8 451 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 SELENOKQ9Y6D0 94 aa6.66□□□□□ -1.34
SMAD4-206ENST00000588860 IGKV3-7A0A075B6H7 116 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 TMEM189A5PLL7 270 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 SOCS3O14543 225 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 HLA-DQA1P01909 254 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 APCSP02743 223 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 S100A8P05109 93 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 S100A2P29034 98 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 SCGB2A2Q13296 93 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 KHDC1LQ5JSQ8 128 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 TMEM78Q5T7P6 136 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 COX8CQ7Z4L0 72 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 REC114Q7Z4M0 266 aa6.65□□□□□ -1.34
SMAD4-206ENST00000588860 ATP5L2Q7Z4Y8 100 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms