RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 SMIM9A6NGZ8 99 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 ERCC8Q13216 396 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 ZNF705AQ6ZN79 300 aaPredicted RBP8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 C9orf47Q6ZRZ4 202 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 SFT2D1Q8WV19 159 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 C20orf144Q9BQM9 153 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 NIPSNAP3BQ9BS92 247 aa8.63□□□□□ -1.03
SDHDP1-201ENST00000588055 IGHV4-28A0A0C4DH34 117 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 TMEM189A5PLL7 270 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 DIRC3C9JPN6 131 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 J3KRW8 73 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 IFNA7P01567 189 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 CT45A10P0DMU9 189 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 FHITP49789 147 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 PPT1P50897 306 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 ZNF138P52744 262 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 UBE2G2P60604 165 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 Q8NAQ8 132 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 SUN5Q8TC36 379 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 NEU1Q99519 415 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 NDFIP1Q9BT67 221 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 X6R8D5 127 aa8.62□□□□□ -1.03
SDHDP1-201ENST00000588055 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 TEX48A0A1B0GUV7 120 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 GPX1P07203 203 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 NMBP08949 121 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 GFI1BQ5VTD9 330 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 Q8TAT8 98 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 LINC01587Q99440 93 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 VGLL1Q99990 258 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 AGPAT4-IT1Q9H0P7 198 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 ZNF492Q9P255 531 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 ARL2-SNX15V9GYD0 113 aa8.61□□□□□ -1.03
SDHDP1-201ENST00000588055 LOC102723971A0A1B0GUV8 181 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 A0A1B0GV50 99 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 C7orf71A4D174 169 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 FBLL1A6NHQ2 334 aaKnown RBP8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 C3orf84H3BNL1 204 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 H7BYZ3 331 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 DEFB4AO15263 64 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 CRXO43186 299 aaPredicted RBP8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 TCRAP04437 139 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 SULT1A2P50226 295 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 NKX2-5P52952 324 aaPredicted RBP8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 SUMO1P63165 101 aaKnown RBP8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 GNG5P63218 68 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 TMPRSS5Q9H3S3 457 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 LENEPQ9Y5L5 61 aa8.6□□□□□ -1.03
SDHDP1-201ENST00000588055 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 CXorf65A6NEN9 183 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 FAM74A7A6NL05 159 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 F6UZH7 168 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 HTN1P15515 57 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 CRISP2P16562 243 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 EMP1P54849 157 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 TAS2R60P59551 318 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 CCDC28AQ8IWP9 274 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 C1orf158Q8N1D5 194 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 C11orf45Q8TAV5 145 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 MBD3L1Q8WWY6 194 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 HIST1H2BAQ96A08 127 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 MANBALQ9NQG1 85 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 EPDR1Q9UM22 224 aa8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 YTHDF2Q9Y5A9 579 aaKnown RBP8.59□□□□□ -1.03
SDHDP1-201ENST00000588055 KLLNB2CW77 178 aa8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 IFNA1P01562 189 aa8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 PMS2P11Q13670 270 aa8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 TMEM75Q8N9X5 138 aa8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 C16orf74Q96GX8 76 aa8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 PYGO2Q9BRQ0 406 aa8.58□□□□□ -1.04
SDHDP1-201ENST00000588055 NUPR2A6NF83 97 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 PEX7O00628 323 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 RGS13O14921 159 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 PAGE4O60829 102 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 UBE2G1P62253 170 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 ALKAL2Q6UX46 152 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 FAM19A4Q96LR4 140 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 TREM1Q9NP99 234 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 PLA2G2EQ9NZK7 142 aa8.57□□□□□ -1.04
SDHDP1-201ENST00000588055 TRAV8-1A0A0A6YYK1 113 aa8.56□□□□□ -1.04
SDHDP1-201ENST00000588055 TRAV1-1A0A0B4J248 108 aa8.56□□□□□ -1.04
SDHDP1-201ENST00000588055 ZNF705GA8MUZ8 300 aaPredicted RBP8.56□□□□□ -1.04
SDHDP1-201ENST00000588055 SPART-AS1P0CW21 52 aa8.56□□□□□ -1.04
SDHDP1-201ENST00000588055 RBMY1A1P0DJD3 496 aaKnown RBP8.56□□□□□ -1.04
SDHDP1-201ENST00000588055 RBMY1CP0DJD4 496 aa8.56□□□□□ -1.04
SDHDP1-201ENST00000588055 AKR1C3P42330 323 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms